Gene Cthe_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2408 
Symbol 
ID4808123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp2874469 
End bp2875197 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID640107821 
Productphage shock protein A, PspA 
Protein accessionYP_001038803 
Protein GI125974893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTT TTAGCAGACT TGGAAGTTTA ATCCGGGGTT TCTTTGGAAT GTTTGTCGGC 
GGACTTGAGG AAAACAATCC GGAGTTGTTG TTCGAAGACA TTAAAAATCA GATAAACAAA 
GCACGTAAGG AAGCGGAACA GCAAATACTC GAAATCCAGA CAAATGCGGA AATGATAAAA 
ATTGAAATGA AGAACGCCGA GAAGAATCTT GCCGCAATAA GGGCAAGAAT TGAAGCTGCC 
CAGAGGCAGG GTGACAAGGA ACTTTTGATT GAGCTTCTCA TGCAGGAAGA GGAATACCAG 
GCTGCTTATG AGACATATAA GGAAACCCAC GATAATGCTT TAAGAGAAGT TGAGAATATA 
CGTGAAAACT ATAAGATATT TGAGTCGGAA ATGACAGCGA AGCTCAATGA GCTTAAGACA 
CTGAAAACTC AGGCAAAGAT GGCAAAACTC AAAGAGAATA TCAACTCGGT AAATGCCAAA 
TACACTTCCA AAAACAACAG GATTGGAAAT ATTAATCAGG ATATTGAGCG TGCAAGAGAA 
ATTGTTAACA AAAAGATTGC AAGAGCCAAT GCGGTTGAAA GCCTGAATGA CGCCAATTCT 
GAGCTCAGGA TTAAGAAACT TGACCTGAAT TCCGCCCGTG AGAGGGCAAA AGCCAGGGCT 
GAAGCTTTGC TCAGCGGTGA GCAGGGATTT GAAGTTAAGG AGAAGACCGA GAACAAAGCA 
ACAAATTAA
 
Protein sequence
MGFFSRLGSL IRGFFGMFVG GLEENNPELL FEDIKNQINK ARKEAEQQIL EIQTNAEMIK 
IEMKNAEKNL AAIRARIEAA QRQGDKELLI ELLMQEEEYQ AAYETYKETH DNALREVENI 
RENYKIFESE MTAKLNELKT LKTQAKMAKL KENINSVNAK YTSKNNRIGN INQDIERARE 
IVNKKIARAN AVESLNDANS ELRIKKLDLN SARERAKARA EALLSGEQGF EVKEKTENKA 
TN