Gene Cthe_2406 details

Gene Information

• Locus tag: Cthe_2406
• ID: 4808121
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 2872160
• End bp: 2872672
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640107819
• Product: hypothetical protein
• Protein accession: YP_001038801
• Protein GI: 125974891
• COG category: [N] Cell motility
• COG ID: [COG1406] Predicted inhibitor of MCP methylation, homolog of CheC

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGGG ATCATTTATA TGCTCCGTTT GTGGAAAGTG TAAAAAAAGT TTTAAAAGAA 
AAAGCGGATA TTGAAATTTG TGAAGAAAAA TTTTATACGG AGAATAAAGA TGTCCAATCC 
TTGGGAGTTG CCTGTGTTGT TAATTTTTTC GGCAGGATAA AGGGAAAATT TTTGATTGAC 
ATGGAAAGGG ACTTGGCTTT TGCGTTGGCA AAAAACATAA AGGGAGAGGA TTTTGATCCT 
GAAGACGAAC CTATGGTGTT GAAGCCTTTT CAGACACTGA GCAAAATTAT TGTGAATAAA 
GCCATAGAAG AACTGAACAA TTTATATTCT GCAAAAATCG AGGCGGCACC GCCCATAGTT 
TTAAAAGGGA AAGACGCTCT TATCACTGTT CCGAAGGTTG AACCTGTGTT TGTTGATTGT 
ACCACCGCTT TCGGCAAACT TAGAATCAAT GTTGCCATAG AAGAAGAAAA CCTGACTGGA 
GAATCATATT CCAAGGTTTT TACTGACAAG TAG 

 

Protein sequence

MAGDHLYAPF VESVKKVLKE KADIEICEEK FYTENKDVQS LGVACVVNFF GRIKGKFLID 
MERDLAFALA KNIKGEDFDP EDEPMVLKPF QTLSKIIVNK AIEELNNLYS AKIEAAPPIV 
LKGKDALITV PKVEPVFVDC TTAFGKLRIN VAIEEENLTG ESYSKVFTDK