Gene Cthe_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2404 
Symbol 
ID4811056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp2871042 
End bp2871734 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID640107817 
ProductGntR family transcriptional regulator 
Protein accessionYP_001038799 
Protein GI125974889 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGAA AGCTTTCAAA GGTAAATCTG AACAACTATA AACCTTTAAG GGAAGTAATT 
TTTGATACTC TCAGGGAAGC TATTATTGCA GGTGAGCTAA AGCCGGGAGA AAGACTTATG 
GAAGTCAAAC TGGCGGAAAA AATGGGAGTC AGCCGTACGC CTGTAAGAGA AGCAATAAGA 
AAACTTGAGC TCGAAGGGCT GGTCGAGATG CTTCCTCGAA AAGGAGCCCA CGTTGCCGAG 
CTTTCGGTTA AGGATATTAT GGATGTTTTG GAGGTCAGGG CCACCCTTGA CGGTTTGGCG 
ACGGCTCTTG CGGCTGAAAG AATAACCGAT GAGGAAATAA AGGAATTGGA ACATGTACAT 
TCGCAGTTTT TGAATTATGC CAATAAAGAC AATTTGCAGG GTTCGATAAA AAAGGACGTG 
GAGTTCCACG AGTTAATATA TCGGGCATCC CGGAACGAGA GGCTTATTCA GATTGCAAAC 
AATTTACGCG AGCAGGTTCA GCGCTTCAGG GTAATATATC TTAAAGATTA CAGCAATCCC 
AGGGAGCTGA TCAAGGAGCA CCAGTACATC CTTGAGGCCA TCTCAACCCG CGACAAAGCG 
GCGGCCCAGG AGTATGCACA AAGGCATATA AACCATCAGG AGGCGGCAAT AATAAAGGCG 
ATAAAAAATA TGAAGGGAGG TGGAGGGGAA TAA
 
Protein sequence
MAGKLSKVNL NNYKPLREVI FDTLREAIIA GELKPGERLM EVKLAEKMGV SRTPVREAIR 
KLELEGLVEM LPRKGAHVAE LSVKDIMDVL EVRATLDGLA TALAAERITD EEIKELEHVH 
SQFLNYANKD NLQGSIKKDV EFHELIYRAS RNERLIQIAN NLREQVQRFR VIYLKDYSNP 
RELIKEHQYI LEAISTRDKA AAQEYAQRHI NHQEAAIIKA IKNMKGGGGE