Gene Cthe_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2395 
Symbol 
ID4811047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2860464 
End bp2861183 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content37% 
IMG OID640107808 
ProductXRE family transcriptional regulator 
Protein accessionYP_001038790 
Protein GI125974880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATC TAGGCAAACT CTTCAAAGAA ATAAGATTAA GTAAAAAATG GTCCATAAGA 
CAGGCCGCTA AAAAGATGGG AATTAGTTAC TCATACTTAA GTATCCTTGA AAAGGGTGTG 
GACCCCCGCA CAGGAAAGGA TTCCAATCCA AAGCCTGAAA CTTTGAAAAT GATTTCAAAG 
GCATATGACT ACCCTTATGA AGAGCTCATG AAAGCAGCGG GATATTTAAG TGAAGATGTC 
CAAATTCAAA AAAAATTTGA CCATGATATT TTTGTAAAAA ATATTTTGCT TATTATGGGT 
AACATGACCG CCGAAGAATT CTCGGACGAC ATATACCAAA AGACAGGATA TCAAATCAAG 
CCTTCCCAGA TAAAAAGCTA TATAGACGGC GACATTGAAC CTTTTCCGGG TACAATAAAC 
ATTCTTTCGA AATATGCCCA GGTAACACCT GATTTCTGGT ATGTGCCCAA TACCGAGGAA 
AGCCTTCGCA AGGAGAGAGA AAAATATAAT GAAACCATTT TGAAAGCCGC CTCTCAGACC 
TTTGACAAAA ATTTTGAGAC GTTTTTAAAT CTTGACGATG ACATTAAAAA CTTTCTTTCC 
TCCGAGGAAA ACATGCCATA CATAAAAGCA GCCATGGAAG CCCGAAGCAA AAACATAAGC 
GCCGATACTT TAAAGCTTCT GATAGATACA ATTGCAAAAG AGGTTAAAAA AGCAAAATAG
 
Protein sequence
MSNLGKLFKE IRLSKKWSIR QAAKKMGISY SYLSILEKGV DPRTGKDSNP KPETLKMISK 
AYDYPYEELM KAAGYLSEDV QIQKKFDHDI FVKNILLIMG NMTAEEFSDD IYQKTGYQIK 
PSQIKSYIDG DIEPFPGTIN ILSKYAQVTP DFWYVPNTEE SLRKEREKYN ETILKAASQT 
FDKNFETFLN LDDDIKNFLS SEENMPYIKA AMEARSKNIS ADTLKLLIDT IAKEVKKAK