Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2392 |
Symbol | |
ID | 4811044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2857007 |
End bp | 2858191 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640107805 |
Product | pyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_001038787 |
Protein GI | 125974877 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00104285 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATAA GAGAAAGGCT TAGCGGTAAT GAGGCAACGG CGATTGCCAT GAGACAAATA AATCCTGATG TGGTTGCTGC TTTTCCGATA ACACCGTCAA CGGAAATTCC TCAATATTTC TCGTCATATG TCGCTGACGG ACTTGTAGAT ACGGAATTTG TTGCTGTGGA ATCAGAGCAC AGTGCAATGT CTGCATGTAT AGGTGCTCAG GCTGCAGGTG CAAGAGCAAT GACTGCCACA TCCGCAAACG GTTTGGCATA TATGTGGGAG GCTTTGTATA TAGCGGCAAG TATGAGACTT CCGATTGTAT TGGCGGCTGT AAACAGAGCA CTTTCAGGTC CTATCAATAT CCACAACGAC CACAGCGATA CAATGGGAGC TAGGGATTCG GGATGGATCC AGTTATACAG TGAAAACAAC CAGGAGGCTT ATGACAACAT GCTTATGGCT CACAGGATAG GTGAGCATCC TGATGTAATG CTTCCTGTCA TGGTCTGCCA GGACGGATTT ATTACTTCTC ACGCAATAGA AAATATTGAA CTGGTGGAAG ATGAGAAAGT TAAGGCTTTT GTAGGAGAAT ACAAACCGAC TCATTATCTT CTCGACAGGG AAAATCCGAT TTCTGTGGGT CCTTTGGATT TGCAGATGCA TTATTTCGAG CACAAGAGAC AGCAGGCACA GGCAATGGAA AACGCCAAAA AGGTAATTCT TGAAGTGGCG GAAGAATTCT ACAAGCTTAC GGGAAGAAAA TACGGATTTT TTGAAGAATA CAAAACCGAT GATGCCGATG TTGCCATTGT TGTTATGAAC TCCACTGCCG GTACTGTAAA ATATGTTATC GACGAGTACA GGGCAAAAGG CAAAAAAGTT GGTTTGATAA AACCTAGAGT ATTCAGACCT TTCCCTGTTG ATGAACTGGC ACAGGCTTTG TCAAAGTTTA AGGCAGTGGC CGTTATGGAC AAGGCTGACA GCTTCAATGC AGCCGGAGGA CCTTTGTTTA CAGAGGTAAC AAGTGCACTC TTCACAAAAG GAGTATTTGG TCCTAAGGTT ATTAACTATA AGTTTGGATT GGGTGGAAGA GACGTTAAAG TTGATGATAT TGAAGTTGTT TGTGAGAAGC TTCTGGAAAT TGCAAGTACA GGCAAGGTAG ACTCAGTATA CAATTACCTT GGTGTTAGAG AGTAG
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Protein sequence | MGIRERLSGN EATAIAMRQI NPDVVAAFPI TPSTEIPQYF SSYVADGLVD TEFVAVESEH SAMSACIGAQ AAGARAMTAT SANGLAYMWE ALYIAASMRL PIVLAAVNRA LSGPINIHND HSDTMGARDS GWIQLYSENN QEAYDNMLMA HRIGEHPDVM LPVMVCQDGF ITSHAIENIE LVEDEKVKAF VGEYKPTHYL LDRENPISVG PLDLQMHYFE HKRQQAQAME NAKKVILEVA EEFYKLTGRK YGFFEEYKTD DADVAIVVMN STAGTVKYVI DEYRAKGKKV GLIKPRVFRP FPVDELAQAL SKFKAVAVMD KADSFNAAGG PLFTEVTSAL FTKGVFGPKV INYKFGLGGR DVKVDDIEVV CEKLLEIAST GKVDSVYNYL GVRE
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