| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2390 |
|---|
| Symbol | |
|---|
| ID | 4811042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2856110 |
|---|
| End bp | 2856688 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640107803 |
|---|
| Product | pyruvate ferredoxin oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001038785 |
|---|
| Protein GI | 125974875 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000533506 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGG TTGTTGAAAT CAGATGGCAC GGGCGCGGCG GACAAGGTGC CAAGACTGCG
TCGCTTCTGC TGGCTGATGC TGCATTCAAT ACCGGAAAAT ACATCCAGGG TTTTCCGGAA
TACGGTCCTG AAAGAATGGG CGCGCCAATT ACAGCTTACA ACAGGATAAG TGATGAGAAA
CTTACCATTC ACAGCAATAT TTATGAACCG GATTATGTTG TGGTTGTAGA TGACACTCTT
TTGACATCCG TTGATGTTAC AGCAGGTTTG AAAGAGGATG GAGCTATTAT CGTCAACACT
CCAAAAACTC CTGACGAAAT AAGACCTCTT TTAAAAGGCT ACAAGGGAAA GGTTTGCACG
ATTGACGCAA GAAAAATTTC CATTGAAACT TTGGGAAAAT ACTTCCCGAA CACCCCAATG
CTTGGTGCAG TTGTAAAGGT TAGCAAGATA ATGGACGAAG AAGAATTCCT CAAGGATATG
GTTGAGTCAT TCAAGCACAA GTTTGCGAAC AAGCCTGAAG TTGTTGAAGG CAATATCAAG
GCCCTGGAGA GGTCAATGCA GGAGGTGAAA GGATTATGA
|
|---|
| Protein sequence | MGKVVEIRWH GRGGQGAKTA SLLLADAAFN TGKYIQGFPE YGPERMGAPI TAYNRISDEK
LTIHSNIYEP DYVVVVDDTL LTSVDVTAGL KEDGAIIVNT PKTPDEIRPL LKGYKGKVCT
IDARKISIET LGKYFPNTPM LGAVVKVSKI MDEEEFLKDM VESFKHKFAN KPEVVEGNIK
ALERSMQEVK GL
|
|---|
| |