| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2386 |
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| Symbol | |
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| ID | 4811038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2851543 |
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| End bp | 2853252 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640107799 |
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| Product | VanW |
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| Protein accession | YP_001038781 |
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| Protein GI | 125974871 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTC CAGCAGTTGA AAATAAAAGT TTGAACCCAA AAACAAAAAT AATACTAATC
TGCCTACTGG TATTAATATC GGTTTGCTTA CTTGTATCCA TATTTTTCGT TTATTCCACT
CTGTCCTATG ACAGGGTCTA TAAAGGAGTG TTTATAAACG ATACAGATGT AAGCCGGATG
ACATTTGATG ATGTTTGCAA TCTTCTTAAA TCAAAGTATT CCGAGAAGGC AAAAGATTTA
AAGGTGGTTT TAAACCATGA AGGCATGGCC GCAGAGGTTG ACCTGTCTGA AATAGATTTG
GAATACAAGA TTGAAGAAGC CGCACAAAAA GCTTTTGATG TGGGCAGAAA AGGAAATATC
TTTGAAAGGT TGTCCGAGAT TTTTAACACC AGCAGGGAAG GTGTTCGGCT AAGTCTGGAG
TATTCTTATA ACTTAGGCAA AGTAAATGAG ATAATCGATG ATTTCTATTC CAAAACATTG
ATTTCGGTCA AAGAAGCAAA CCTGTCCATT CAAGACAACA AGGTAACCCT TACCACCGGT
CATCCCGGCA AATCAATAGA CAAAGAAAAA GCTTTGGAAA TTATTGATAA TTCTATTAAA
ACATGCGAGG GCGGAACTTT TGACGTGCCT GTTATAACAA CCATGCCAAA AGCTATCGGC
GTCGATGACA TTTACAATCA AATAGTCGTA CAACCGGTGG ATGCAAAAGC AGTCGTTGAA
AACAACAAGG TAAGAGTTGT TCCCCACGAG TTGGGCCGCG AAATTTCAAA GTCCGAACTT
GCCGACATAA TAAAGGAAAA TGAAAATACG ACGGACAAGG AAATATTGCT TCCGGTAAAA
TTTATACAGC CGAAAGTTAC AACCGATGAA GTAAACGCAA AGCTTTTCAG AGATGTTCTT
GCCTCATCAA GTACTTCATT TTCCACATCC GGTCAAAACA ATTACAACAG AGGCATAAAC
ATAGGCGTTG CGGCATCAAA AATAAACGGA AAAATTCTTG CTCCCGGCGA AGTTTTCTCA
TTCAATGACG TAGTCGGTCC AAGAACGGTG GCAAACGGTT TTAAGATTGC AAAAGAATAT
GTCAACGGTA AAATAGTGGA CGGAGTCGGC GGAGGAGTGT GCCAGGTTTC GTCAACTCTG
TACAGTGCGG TGCTTTTTGC CGACCTTGAG ACAGTGGAAA GACAAAATCA TATGTTTACG
GTATCATACA TCCCTCTGGG AAGAGATGCC GCCGTAGCAT ACAACGAACT GGACTTTAAG
TTTAAAAACA ATACAAACTG GCCGATTAAA ATTGTGTCCA GCGTAAAGAA CAACACCGTA
TCTTTTACAA TTTACGGCAC AAAGGAAGAG CCGGGAAAAA CCGTAGAACT TAAACATGTT
CAGGTAAGTT CCCAGCCATC ACCCGTCAAA TATATAGACG ACCCAAATCT TGAAGAAGGC
AAGACAGTGG TTGTTCAATC CGGATATACG GGATATACAA TAGACACATA TAAAATAGTA
AAGATTAACG GTAATGTTGT AAGTAACAAC AAGATTCACA GAAGCATCTA CAGACCCTAT
GAAACCATAA TTAAGAGAGG TACCAAAAAA GTTGAGAAAG TGGTACAAAC CAACTCTCCG
GCTCCCGAAA CAGTATTATC GCCTACATCT GATCCAACAC CCGATCCTGC AGCTTCGAAT
GAAGTTGTTG ATGAAACACT CGTAGAATAA
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| Protein sequence | MTGPAVENKS LNPKTKIILI CLLVLISVCL LVSIFFVYST LSYDRVYKGV FINDTDVSRM
TFDDVCNLLK SKYSEKAKDL KVVLNHEGMA AEVDLSEIDL EYKIEEAAQK AFDVGRKGNI
FERLSEIFNT SREGVRLSLE YSYNLGKVNE IIDDFYSKTL ISVKEANLSI QDNKVTLTTG
HPGKSIDKEK ALEIIDNSIK TCEGGTFDVP VITTMPKAIG VDDIYNQIVV QPVDAKAVVE
NNKVRVVPHE LGREISKSEL ADIIKENENT TDKEILLPVK FIQPKVTTDE VNAKLFRDVL
ASSSTSFSTS GQNNYNRGIN IGVAASKING KILAPGEVFS FNDVVGPRTV ANGFKIAKEY
VNGKIVDGVG GGVCQVSSTL YSAVLFADLE TVERQNHMFT VSYIPLGRDA AVAYNELDFK
FKNNTNWPIK IVSSVKNNTV SFTIYGTKEE PGKTVELKHV QVSSQPSPVK YIDDPNLEEG
KTVVVQSGYT GYTIDTYKIV KINGNVVSNN KIHRSIYRPY ETIIKRGTKK VEKVVQTNSP
APETVLSPTS DPTPDPAASN EVVDETLVE
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