Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2367 |
Symbol | |
ID | 4809005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2831923 |
End bp | 2832798 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640107778 |
Product | protein translocase subunit yidC |
Protein accession | YP_001038762 |
Protein GI | 125974852 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000622766 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATTA TTTCGCAGTT GTTAGGACAG ATATTGGTTT TTATCTATGA AAATTTATCC TTTGGCAGCT ATGGACTGGC AATCATTTTG TTTACGGTGT TTATTAAGTT ATTGCTGTTG CCTTTGTCGA TAAAGCAGTA CAAGTCATCT TTAAAAATGC AGGAAATGCA GCCTTTGATA CAGGAAATTC AGAGAAAATA CAAAAATGAT CCTCAAAAAC AAAGCGAGGA ATTGATGAAT CTTTACAAGG AGCATAATTT CAGTCCTGCC AGCGGTTGCC TGACCAGCTT TATTCAGCTG CCCATAATAG TATCGCTGTA TTATGTTATC AGAGAGCCTC TTACTTATAT GTTCAATATG ACGAAGGACC AGATAGAAGC TTTGGTAAAT CAGTTGAATC AGGCTGCAAA CGGTTTGCCT CAAATAAATA CGAGGAGCAT ATACTTTCAA ATAGAAGCCG CTTTAAGAAG CGGAAAGCTT GATGTGGTGG AAGAACTGGG ATTTATAAAA TTTGATTTGG GTAAAATACC GAAATTGAAT TTTACCGAGG ATGTGGCGAC ATATCTTCCG TTGTTGCTGA TACCGGTACT TGCGATCGTT GCAACTTATT TTTCAAGCAA GATGATGATG AAGAGGACTC AAAGTTTAAG AAGTTCGACC AATTCGAAAA AGTCGAAGAA CCAGAGCCAG GATGACATGA CGGCTGCAAT GAACAAGAGT ATGATGTGGA TTGCTCCCGT AATGACAGGT ATTATTTCGT TCCAGGCTCC GGCCGCATTG GGATTGTATT GGCTTACAAG CAATGTTTTT CAGATAATTC AAGAATTTAT AATAAATAAA TTTATTATGA AAAAGAAGGA GGACTCGGAT AGTTAA
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Protein sequence | MGIISQLLGQ ILVFIYENLS FGSYGLAIIL FTVFIKLLLL PLSIKQYKSS LKMQEMQPLI QEIQRKYKND PQKQSEELMN LYKEHNFSPA SGCLTSFIQL PIIVSLYYVI REPLTYMFNM TKDQIEALVN QLNQAANGLP QINTRSIYFQ IEAALRSGKL DVVEELGFIK FDLGKIPKLN FTEDVATYLP LLLIPVLAIV ATYFSSKMMM KRTQSLRSST NSKKSKNQSQ DDMTAAMNKS MMWIAPVMTG IISFQAPAAL GLYWLTSNVF QIIQEFIINK FIMKKKEDSD S
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