Gene Cthe_2367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2367 
Symbol 
ID4809005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2831923 
End bp2832798 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content38% 
IMG OID640107778 
Productprotein translocase subunit yidC 
Protein accessionYP_001038762 
Protein GI125974852 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000622766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATTA TTTCGCAGTT GTTAGGACAG ATATTGGTTT TTATCTATGA AAATTTATCC 
TTTGGCAGCT ATGGACTGGC AATCATTTTG TTTACGGTGT TTATTAAGTT ATTGCTGTTG
CCTTTGTCGA TAAAGCAGTA CAAGTCATCT TTAAAAATGC AGGAAATGCA GCCTTTGATA
CAGGAAATTC AGAGAAAATA CAAAAATGAT CCTCAAAAAC AAAGCGAGGA ATTGATGAAT
CTTTACAAGG AGCATAATTT CAGTCCTGCC AGCGGTTGCC TGACCAGCTT TATTCAGCTG
CCCATAATAG TATCGCTGTA TTATGTTATC AGAGAGCCTC TTACTTATAT GTTCAATATG
ACGAAGGACC AGATAGAAGC TTTGGTAAAT CAGTTGAATC AGGCTGCAAA CGGTTTGCCT
CAAATAAATA CGAGGAGCAT ATACTTTCAA ATAGAAGCCG CTTTAAGAAG CGGAAAGCTT
GATGTGGTGG AAGAACTGGG ATTTATAAAA TTTGATTTGG GTAAAATACC GAAATTGAAT
TTTACCGAGG ATGTGGCGAC ATATCTTCCG TTGTTGCTGA TACCGGTACT TGCGATCGTT
GCAACTTATT TTTCAAGCAA GATGATGATG AAGAGGACTC AAAGTTTAAG AAGTTCGACC
AATTCGAAAA AGTCGAAGAA CCAGAGCCAG GATGACATGA CGGCTGCAAT GAACAAGAGT
ATGATGTGGA TTGCTCCCGT AATGACAGGT ATTATTTCGT TCCAGGCTCC GGCCGCATTG
GGATTGTATT GGCTTACAAG CAATGTTTTT CAGATAATTC AAGAATTTAT AATAAATAAA
TTTATTATGA AAAAGAAGGA GGACTCGGAT AGTTAA
 
Protein sequence
MGIISQLLGQ ILVFIYENLS FGSYGLAIIL FTVFIKLLLL PLSIKQYKSS LKMQEMQPLI 
QEIQRKYKND PQKQSEELMN LYKEHNFSPA SGCLTSFIQL PIIVSLYYVI REPLTYMFNM
TKDQIEALVN QLNQAANGLP QINTRSIYFQ IEAALRSGKL DVVEELGFIK FDLGKIPKLN
FTEDVATYLP LLLIPVLAIV ATYFSSKMMM KRTQSLRSST NSKKSKNQSQ DDMTAAMNKS
MMWIAPVMTG IISFQAPAAL GLYWLTSNVF QIIQEFIINK FIMKKKEDSD S