Gene Cthe_2361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2361 
Symbol 
ID4808999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2823193 
End bp2825676 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content42% 
IMG OID640107772 
ProductDNA gyrase subunit A 
Protein accessionYP_001038756 
Protein GI125974846 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01061] DNA topoisomerase IV, A subunit, Gram-positive
[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00518277 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATA CAAAGGATGT AAAGCAACAA AGAATAATAC CTGTTAATAT TGAGACGGAA 
ATGAAAAAGT CCTTTATTGA TTACGCCATG AGTGTAATCG TGGACCGTGC CCTGCCTGAT
GTAAGGGATG GTCTTAAACC TGTTCACCGA AGAATACTTT ACGCAATGTA CGGTCTTGGG
TTTACACCGG ACAAGGCATA TAGAAAATGT GCCACAACCG TCGGTGAAGT TTTGGGTAAA
TACCATCCCC ACGGAGATGC CGCGGTTTAT GACAGTCTGG TGCGCATGGC ACAAAATTTC
TCGTTGAGGT ATACTCAGAT TGACGGTCAC GGCAATTTTG GTTCAATTGA CGGGGACCCG
CCGGCAGCCA TGAGGTATAC CGAGGCAAGA CTGTCCAAAA TTTCCATGGA AATGCTCAGG
GACATTAACA AAGACACCGT TGATTTCAAA CCGAACTTTG ATGAGCATCA CATGGAGCCG
GTGGTATTGC CTTCAAGATT TCCGAATCTG TTGGTGAACG GTTCTTCCGG TATTGCCGTG
GGCATGGCAA CCAACATACC TCCTCACAAT TTGGTTGAAG TTATCGACGG TGTTATTAAA
GTAATAGACG ATCCGAATGT TACTCTTGAT GAGCTTATGA AAATAATCAA GGGTCCTGAT
TTCCCGACGG CCGGCATCAT AGTCGGAAAA CAGGGTATCA GGGATGCATA TGCCACAGGA
AAAGGAAAGA TCATTGTAAG AGCCGTTGCC ACAATTGAGC AAATGCCGGG CAACAAGCAG
CGCATAGTTG TAACGGAACT TCCTTATCAG GTTAACAAAG CCAAATTGAT TGAAAGAATA
GCGGAATTGG TTAAAGAAAA GAGAATTGAC AGTATTTCAG ATTTAAGAGA TGAGTCCGAC
AAGGACGGAA TGCGGATTGT TATTGAACTT AAAAAAGATG CGAATGCAAA TGTTGTTTTA
AATCAGCTTT ACAAAAACAC CCAAATGCAG GATGCATTTA ATGTAAACAT GGTGGCTCTT
GTACTCAATA ACGAGAAAAA GTTTGAGCCG AGGGTTCTTA ATTTAAGACA GGCGATAGAT
TATTACATCA AGCATCAAGA GGATGTAATA GTAAGGAGGA CCAAATTTGA CCTTGACAAG
GCCGAGGCAA GGGCTCATAT ATTGGAAGGA TTGAGAATTG CCATAGACAA CCTTGATGAG
GTAATAAACA TCATCCGGTC TTCGAGAAAC GAATCCGATG CAAAAGAGGC ATTGATACAG
AGGTTTGGAT TTAGTGAAAA ACAGGCGCAG GCGATTGTGG ACATGAGACT GGGCAGACTT
ACTGCTCTGG AAAGAGAAAA GATTGACAAC GAATATAAAG AACTTTTGAA GGAAATTAAA
TATTACAAGG ATGTTCTTGC AAATAAATCA ATGGTATTGG ATATTATTAA AAAAGAGCTG
GAGGAAATTA AACAAAAGTA TGGGGACGAA AGAAGGACGA AAATCATCCC TGATGAAGAC
GAAATAGAAA TTGAAGACCT TATAGAAGTT GAAGAAAATG TTGTAACCCT TACCCATTTT
GGATATATAA AAAGACTTCC GACCAGCACT TACAAGAGCC AAAAAAGAGG CGGAAAAGGT
GTAATTGGAC TTAGCACCCG GGAAGAAGAC TTTGTTGAGC AACTGTTTAT AACTTCGACC
CATGATTACA TACTGTTCTT TACAAACAAG GGCAAGGTTT ACAGGCTAAA GACCTATGAA
ATACCCGAAG CCGGAAGACA GGCAAAAGGA ACGGCAATAG TAAATCTTCT GCAGCTTGAC
CAGAATGAAA AAATCACTAC GGTGATTCCT ATATCTGAAT ACAAAGAAGG CCTGTATTTG
TTCATGGCAA CCAAACACGG CATAGTCAAG AAAACGGATT TGATGGAGTT TGACAACATC
AGAAAAGGCG GCCTTACAGC GGTTTCCTTG AGGGAAAATG ACGAGCTTAT CGACGTAAGG
CTTACCGACG GTACGAAAAA TATTCTGCTG GTGACCAGAA ACGGTATGTC CATAAGATTT
AATGAGAAAG ATGTAAGACC ATTGGGAAGA GCGGCCCAGG GAGTAAAAGG CATTACTCTT
GAGGAAGATG ATGAAGTAGT GGGCATGAGT GCCGACATTG AAAACGCCAG CGTGCTTGTG
GTAACCGAAA GGGGCTTCGG AAAGAGAACG GAGCTTGATG AGTACAAGGT TCAGATTAGA
GGCGGCAAAG GTATCCTTAC GTACAGAGTT ACCGAGAAAA CCGGAAAGGT TGCCGGTATG
AAACTTGTAT CCGAAGATGA CGATGTGATG ATGATAAGTT CCGACGGAAG CATTATAAGG
ATAAAAGCAA AAGATATAAG TCTTCTGGGA AGAGCGACGC AAGGAGTGAC TCTCATGAGA
ATGGATGAGG GTGTCTCTGT TGTAAGCGTT GCAAGAATAG TAAATGATGA CGAAGAAGAA
AAAGATGATG AAGAAAAAGA ATAG
 
Protein sequence
MSDTKDVKQQ RIIPVNIETE MKKSFIDYAM SVIVDRALPD VRDGLKPVHR RILYAMYGLG 
FTPDKAYRKC ATTVGEVLGK YHPHGDAAVY DSLVRMAQNF SLRYTQIDGH GNFGSIDGDP
PAAMRYTEAR LSKISMEMLR DINKDTVDFK PNFDEHHMEP VVLPSRFPNL LVNGSSGIAV
GMATNIPPHN LVEVIDGVIK VIDDPNVTLD ELMKIIKGPD FPTAGIIVGK QGIRDAYATG
KGKIIVRAVA TIEQMPGNKQ RIVVTELPYQ VNKAKLIERI AELVKEKRID SISDLRDESD
KDGMRIVIEL KKDANANVVL NQLYKNTQMQ DAFNVNMVAL VLNNEKKFEP RVLNLRQAID
YYIKHQEDVI VRRTKFDLDK AEARAHILEG LRIAIDNLDE VINIIRSSRN ESDAKEALIQ
RFGFSEKQAQ AIVDMRLGRL TALEREKIDN EYKELLKEIK YYKDVLANKS MVLDIIKKEL
EEIKQKYGDE RRTKIIPDED EIEIEDLIEV EENVVTLTHF GYIKRLPTST YKSQKRGGKG
VIGLSTREED FVEQLFITST HDYILFFTNK GKVYRLKTYE IPEAGRQAKG TAIVNLLQLD
QNEKITTVIP ISEYKEGLYL FMATKHGIVK KTDLMEFDNI RKGGLTAVSL RENDELIDVR
LTDGTKNILL VTRNGMSIRF NEKDVRPLGR AAQGVKGITL EEDDEVVGMS ADIENASVLV
VTERGFGKRT ELDEYKVQIR GGKGILTYRV TEKTGKVAGM KLVSEDDDVM MISSDGSIIR
IKAKDISLLG RATQGVTLMR MDEGVSVVSV ARIVNDDEEE KDDEEKE