Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2361 |
Symbol | |
ID | 4808999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2823193 |
End bp | 2825676 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640107772 |
Product | DNA gyrase subunit A |
Protein accession | YP_001038756 |
Protein GI | 125974846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01061] DNA topoisomerase IV, A subunit, Gram-positive [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00518277 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATA CAAAGGATGT AAAGCAACAA AGAATAATAC CTGTTAATAT TGAGACGGAA ATGAAAAAGT CCTTTATTGA TTACGCCATG AGTGTAATCG TGGACCGTGC CCTGCCTGAT GTAAGGGATG GTCTTAAACC TGTTCACCGA AGAATACTTT ACGCAATGTA CGGTCTTGGG TTTACACCGG ACAAGGCATA TAGAAAATGT GCCACAACCG TCGGTGAAGT TTTGGGTAAA TACCATCCCC ACGGAGATGC CGCGGTTTAT GACAGTCTGG TGCGCATGGC ACAAAATTTC TCGTTGAGGT ATACTCAGAT TGACGGTCAC GGCAATTTTG GTTCAATTGA CGGGGACCCG CCGGCAGCCA TGAGGTATAC CGAGGCAAGA CTGTCCAAAA TTTCCATGGA AATGCTCAGG GACATTAACA AAGACACCGT TGATTTCAAA CCGAACTTTG ATGAGCATCA CATGGAGCCG GTGGTATTGC CTTCAAGATT TCCGAATCTG TTGGTGAACG GTTCTTCCGG TATTGCCGTG GGCATGGCAA CCAACATACC TCCTCACAAT TTGGTTGAAG TTATCGACGG TGTTATTAAA GTAATAGACG ATCCGAATGT TACTCTTGAT GAGCTTATGA AAATAATCAA GGGTCCTGAT TTCCCGACGG CCGGCATCAT AGTCGGAAAA CAGGGTATCA GGGATGCATA TGCCACAGGA AAAGGAAAGA TCATTGTAAG AGCCGTTGCC ACAATTGAGC AAATGCCGGG CAACAAGCAG CGCATAGTTG TAACGGAACT TCCTTATCAG GTTAACAAAG CCAAATTGAT TGAAAGAATA GCGGAATTGG TTAAAGAAAA GAGAATTGAC AGTATTTCAG ATTTAAGAGA TGAGTCCGAC AAGGACGGAA TGCGGATTGT TATTGAACTT AAAAAAGATG CGAATGCAAA TGTTGTTTTA AATCAGCTTT ACAAAAACAC CCAAATGCAG GATGCATTTA ATGTAAACAT GGTGGCTCTT GTACTCAATA ACGAGAAAAA GTTTGAGCCG AGGGTTCTTA ATTTAAGACA GGCGATAGAT TATTACATCA AGCATCAAGA GGATGTAATA GTAAGGAGGA CCAAATTTGA CCTTGACAAG GCCGAGGCAA GGGCTCATAT ATTGGAAGGA TTGAGAATTG CCATAGACAA CCTTGATGAG GTAATAAACA TCATCCGGTC TTCGAGAAAC GAATCCGATG CAAAAGAGGC ATTGATACAG AGGTTTGGAT TTAGTGAAAA ACAGGCGCAG GCGATTGTGG ACATGAGACT GGGCAGACTT ACTGCTCTGG AAAGAGAAAA GATTGACAAC GAATATAAAG AACTTTTGAA GGAAATTAAA TATTACAAGG ATGTTCTTGC AAATAAATCA ATGGTATTGG ATATTATTAA AAAAGAGCTG GAGGAAATTA AACAAAAGTA TGGGGACGAA AGAAGGACGA AAATCATCCC TGATGAAGAC GAAATAGAAA TTGAAGACCT TATAGAAGTT GAAGAAAATG TTGTAACCCT TACCCATTTT GGATATATAA AAAGACTTCC GACCAGCACT TACAAGAGCC AAAAAAGAGG CGGAAAAGGT GTAATTGGAC TTAGCACCCG GGAAGAAGAC TTTGTTGAGC AACTGTTTAT AACTTCGACC CATGATTACA TACTGTTCTT TACAAACAAG GGCAAGGTTT ACAGGCTAAA GACCTATGAA ATACCCGAAG CCGGAAGACA GGCAAAAGGA ACGGCAATAG TAAATCTTCT GCAGCTTGAC CAGAATGAAA AAATCACTAC GGTGATTCCT ATATCTGAAT ACAAAGAAGG CCTGTATTTG TTCATGGCAA CCAAACACGG CATAGTCAAG AAAACGGATT TGATGGAGTT TGACAACATC AGAAAAGGCG GCCTTACAGC GGTTTCCTTG AGGGAAAATG ACGAGCTTAT CGACGTAAGG CTTACCGACG GTACGAAAAA TATTCTGCTG GTGACCAGAA ACGGTATGTC CATAAGATTT AATGAGAAAG ATGTAAGACC ATTGGGAAGA GCGGCCCAGG GAGTAAAAGG CATTACTCTT GAGGAAGATG ATGAAGTAGT GGGCATGAGT GCCGACATTG AAAACGCCAG CGTGCTTGTG GTAACCGAAA GGGGCTTCGG AAAGAGAACG GAGCTTGATG AGTACAAGGT TCAGATTAGA GGCGGCAAAG GTATCCTTAC GTACAGAGTT ACCGAGAAAA CCGGAAAGGT TGCCGGTATG AAACTTGTAT CCGAAGATGA CGATGTGATG ATGATAAGTT CCGACGGAAG CATTATAAGG ATAAAAGCAA AAGATATAAG TCTTCTGGGA AGAGCGACGC AAGGAGTGAC TCTCATGAGA ATGGATGAGG GTGTCTCTGT TGTAAGCGTT GCAAGAATAG TAAATGATGA CGAAGAAGAA AAAGATGATG AAGAAAAAGA ATAG
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Protein sequence | MSDTKDVKQQ RIIPVNIETE MKKSFIDYAM SVIVDRALPD VRDGLKPVHR RILYAMYGLG FTPDKAYRKC ATTVGEVLGK YHPHGDAAVY DSLVRMAQNF SLRYTQIDGH GNFGSIDGDP PAAMRYTEAR LSKISMEMLR DINKDTVDFK PNFDEHHMEP VVLPSRFPNL LVNGSSGIAV GMATNIPPHN LVEVIDGVIK VIDDPNVTLD ELMKIIKGPD FPTAGIIVGK QGIRDAYATG KGKIIVRAVA TIEQMPGNKQ RIVVTELPYQ VNKAKLIERI AELVKEKRID SISDLRDESD KDGMRIVIEL KKDANANVVL NQLYKNTQMQ DAFNVNMVAL VLNNEKKFEP RVLNLRQAID YYIKHQEDVI VRRTKFDLDK AEARAHILEG LRIAIDNLDE VINIIRSSRN ESDAKEALIQ RFGFSEKQAQ AIVDMRLGRL TALEREKIDN EYKELLKEIK YYKDVLANKS MVLDIIKKEL EEIKQKYGDE RRTKIIPDED EIEIEDLIEV EENVVTLTHF GYIKRLPTST YKSQKRGGKG VIGLSTREED FVEQLFITST HDYILFFTNK GKVYRLKTYE IPEAGRQAKG TAIVNLLQLD QNEKITTVIP ISEYKEGLYL FMATKHGIVK KTDLMEFDNI RKGGLTAVSL RENDELIDVR LTDGTKNILL VTRNGMSIRF NEKDVRPLGR AAQGVKGITL EEDDEVVGMS ADIENASVLV VTERGFGKRT ELDEYKVQIR GGKGILTYRV TEKTGKVAGM KLVSEDDDVM MISSDGSIIR IKAKDISLLG RATQGVTLMR MDEGVSVVSV ARIVNDDEEE KDDEEKE
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