Gene Cthe_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2358 
Symbol 
ID4808992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2812608 
End bp2813261 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content38% 
IMG OID640107765 
Productaccessory gene regulator B 
Protein accessionYP_001038753 
Protein GI125974843 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG4512] Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000360105 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTCA TTAATGCTTT ATCATACAAG AGTGCCGACT ACTTAATGAG GCAGATGAAT 
GGCAATCATG AAAGCAGAAG GGTTTACTAC TATGGCTTTC AGATTGTGAT AGGTGCGCTG
TTTAAAGGCT TGTTACTTCT GCTGTTGGCC TTTATAACCG GTACAATGCT TCCGGCTTTG
ACGATAGTAG CGGCATTTGT AATACTAAGG TCAATTGCCG GGGGATACCA TATGAAGACA
TACGGAAAAT GTATAGCGGC CTCTTTGGGT ATGATTATTC TTGCGGCACT GATTTCCAAA
TATACAGCTC ATATGTTGAA TCAAATTTCG TTAATAGCGA TCGTAGTACT ATCATTTGTC
TTTTCATCAG CTTCTCTCAT AAAATGGGCT CCTGCCGATA ATCCGAACAG ACCGATTACC
GACAAAAAAG AAATCAAAAA GTTTAGGATA CTGTCAATGA TTTATATTGT AATTTGGCTT
GTTTTGAGTC TGACTTTGGT TTATTTCAAG CAAAATATGT TTGTGCTGGC ACTTTGCCTG
GGAGTGATTT TAGAAGTCTT TTCAATAACA CCTGCAGGAA TAAGATTTTT TAAAATGATT
GAGAAGGGCA TGGATTCGGT AAAAAATGAT ATAAACAGGC ACTCCTCAAA ATGA
 
Protein sequence
MRFINALSYK SADYLMRQMN GNHESRRVYY YGFQIVIGAL FKGLLLLLLA FITGTMLPAL 
TIVAAFVILR SIAGGYHMKT YGKCIAASLG MIILAALISK YTAHMLNQIS LIAIVVLSFV
FSSASLIKWA PADNPNRPIT DKKEIKKFRI LSMIYIVIWL VLSLTLVYFK QNMFVLALCL
GVILEVFSIT PAGIRFFKMI EKGMDSVKND INRHSSK