Gene Cthe_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2345 
Symbol 
ID4808979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2794605 
End bp2795753 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content40% 
IMG OID640107752 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001038740 
Protein GI125974830 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAC CAAAAGAAAT TAATACAGAA AATAAATCCA AAAAGCGAAT ATATCTATCT 
TCGCCACATA TGAGTGACGA AGGATATGAA AAACAATATA TTAATGAGGC ATTTGAGACT
AATTGGATTG CACCGCTGGG AAAAAACGTT GACGAATTTG AAAAGGAGCT GGCAGCAAAA
GTAGGAATAA AAGCCGCTGC AGCGTTATCA TCGGGCACAG CCGCCATTCA TATGGCGCTA
AAGGCTGCCG GAGTAGGTGA GGGGGATATT GTGTTTTGCC CGACACTTAC TTTTGCAGCT
ACCGCCAATC CAATAATATA TCAGAATGCA ATACCGGTGT TCATCGACAG CGATTATGAG
ACTTGGAATA TGAGCCCTGA AGCTTTGGAA GAGGCTTTTA AAAAATATCC AAAGGTGAAG
GCTGTGCTGG TAGTGCATCT TTACGGATTA TCAGCCGATA TGGATAAAAT AGTTGAGATA
TGCAAAAAAC ATGATGTTCA ACTTATTGAA GATGCTGCTG AATCTTTGGG TACCACTTAT
AAAGGCAGAT ATACAGGTAC TATTGGGGAC TATGGCATTT ATTCCTTCAA CGGCAACAAG
ATTATTACTA CTTCCGGCGG CGGTATGTTA GTGTCGGATA ATGAAGAGAG AATTGCGAAA
GTAAGATTTT GGGCAACTCA GGCAAGGGAC AATGCCAGAC ACTATCAGCA CAGCGAACTG
GGTTATAACT ACAGGATGAG CAATGTAATT GCCGGAATTG GCAGAGGGCA GTTAAAAGTT
TTGGATCAGA GAATAGAGAA AAAAAGGTAT ATATTTGATT TTTATAAAAG GGAATTGGGC
TGCATTGATG AAATTGATTT TATGCCTGTC AATGACTGGA ATAAACCCAA CTGCTGGCTT
ACCTGCATTA CATTGACGGG CAAAGTCAGA CCTTTGGATG TGATAATAAG GCTGGAAGAG
GAAAATATAG AGTCAAGACC AGTATGGAAG CCCATGCATA TGCAGCCGTT TTATCAACAT
TATGATTACA TTGGCTCAAA TGTTTCGGAG AAGATATTTG AAAACGGTGT TTGTCTGCCT
AGCGATACCA AAATGACGGA TGAGGATCTA TACAGAGTTG TAAATATTAT AAAAGGGTTG
TGGAAATAG
 
Protein sequence
MLKPKEINTE NKSKKRIYLS SPHMSDEGYE KQYINEAFET NWIAPLGKNV DEFEKELAAK 
VGIKAAAALS SGTAAIHMAL KAAGVGEGDI VFCPTLTFAA TANPIIYQNA IPVFIDSDYE
TWNMSPEALE EAFKKYPKVK AVLVVHLYGL SADMDKIVEI CKKHDVQLIE DAAESLGTTY
KGRYTGTIGD YGIYSFNGNK IITTSGGGML VSDNEERIAK VRFWATQARD NARHYQHSEL
GYNYRMSNVI AGIGRGQLKV LDQRIEKKRY IFDFYKRELG CIDEIDFMPV NDWNKPNCWL
TCITLTGKVR PLDVIIRLEE ENIESRPVWK PMHMQPFYQH YDYIGSNVSE KIFENGVCLP
SDTKMTDEDL YRVVNIIKGL WK