Gene Cthe_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2339 
Symbol 
ID4809267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2788746 
End bp2789789 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content36% 
IMG OID640107746 
Productglycosyl transferase, group 1 
Protein accessionYP_001038734 
Protein GI125974824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAG TGGGAATATG CGGGCACTTT GGAGGTAATC ATAACTTCCT GGATGGACAA 
ACCATAAAGG TTAAGTCTCT GACGGAAGCT ATAAAAGACA ACATCGGTGA ACATAACGTT
TTATGCGTTG ATACGTACAA CTGGAAAAAA AGACCTATAA GGCTTCTAAG GAAATGCTTT
CGTCTTGCAA GAAAGTGCAA AAATATTGTT ATACTTCCCG CACAAAATGG GATTAAGGTC
TTAGTGCCCC TATTTTCACT AATAAATAAA CTGTTTGGCA GAAAGTTGTT TTATGTTGTT
ATTGGGGGAT GGCTTCCTAC ATTTTTAAAG AATTATAAAT GGTTGGTTTC CTGGCTTCAC
CATATGGATG GCATATTTGT AGAGACTGCA TCAATGTCAG AAAAGCTTAT TGAATTTGGC
CTGAAAAATG TATTGGTAAT GCCCAACTTC AGACAGTTAA GAATAGTGGA TATAAACGAA
CTGCAGGATA CGCATGCTTT ACCCTATAAG CTATGCACAT TTTCCAGAGT TTTAAAAGAA
AAGGGGATAG AGGATGCTAT AAATGCAGTT ATAAAGGTAA ATACTGATTG TGGCAGGGAA
GTGTGTACAC TGGATATATA TGGGCAAATT GATGAAAAAT ACAAAGATGC GTTTTGGGCG
ATAATGTCTA ATGTTCCAGC CTATATAAAA TATAAAGGAG AGGCTCCTTA TGAAAAAGCT
GTTGATGTTT TAAAAGATTA TTATCTTATG TTATTTCCAA CATATTATGA GGGAGAAGGT
TTTGCCGGAA CGATAATAGA TGCTTTTGCT TCAGGGCTTC CGGTTATTGC CTCCGATTGG
CGTTACAACT CTGAGATAGT ACAGGATTAT AAGACAGGAC GGATTTTTCG GACAAAGGAT
ATCAAAGAGT TGGCAGAAAT AATTCTGTAT TGTTTGGAAC ACGGGGACGA AGTAATGGAA
ATGAAGAAAA ATTGTATTGA AGAAGCACGT AAATATACTT CCGGGAATGC AATTAAGAAA
TTAATTGAGG TATTGGATAA CTAG
 
Protein sequence
MLKVGICGHF GGNHNFLDGQ TIKVKSLTEA IKDNIGEHNV LCVDTYNWKK RPIRLLRKCF 
RLARKCKNIV ILPAQNGIKV LVPLFSLINK LFGRKLFYVV IGGWLPTFLK NYKWLVSWLH
HMDGIFVETA SMSEKLIEFG LKNVLVMPNF RQLRIVDINE LQDTHALPYK LCTFSRVLKE
KGIEDAINAV IKVNTDCGRE VCTLDIYGQI DEKYKDAFWA IMSNVPAYIK YKGEAPYEKA
VDVLKDYYLM LFPTYYEGEG FAGTIIDAFA SGLPVIASDW RYNSEIVQDY KTGRIFRTKD
IKELAEIILY CLEHGDEVME MKKNCIEEAR KYTSGNAIKK LIEVLDN