| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2334 |
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| Symbol | |
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| ID | 4809262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2781498 |
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| End bp | 2783342 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640107741 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001038729 |
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| Protein GI | 125974819 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA AGATTAGAGC AAATGGATTA ATTGCAATTG ATGTGTTTTT AGTAAATATA
TCGCTTGTTA TTGCATATCT TTTGAGGTTT GACTTAAACT ATGCAAATAT TCCGGAACGT
TTTATCGAAC CCTTGGTAAA GCTCGCCGTA ATTTCAACAG TTGTTAAACT TATAACTTAT
GCTGTGATGA AGCTTTACAA CAGTTTGTGG AAGTATGCGG GAATATATGA AGTGGTTATG
GTTATAGCTG CTTCATTTAT CAGCAATTCA ATAATGATAA GCTATGTGTT TTTATCCCAA
ACGCCCGTAC CTCGAAGTAT ATTCCTGATA TGCATCTTGA CGGATATTGC CCTGATTGGG
GGAGTACGGT TTGCTTACAG GGTGTTTAGA AGAATTGTCA AAGGGGAAAT GATTCGTTTT
ACAAATTCAA AGAGGGTGCT GATTGCAGGC GCCGGGGACG CCGGCGCGAT AATTGTGAAG
GAAATGAAGT CCCATCCTAA ACTTAAAAGC ACTCCGGTGG CGTTTGTAGA TGACGATAAA
TACAAAATAG GCAAAAAAAT CAGCGGAGTG CCTGTGGTGG GTGAGACAAA GGATGTTTCA
GAAATAATAC AGAAGCTGCA GATAGACGAA GTCATTATTG CCATGCCGTC TGCCAGCCAC
AAAAAAATAA ATGATATATA CACCGGCTGT GCCCAAACAA ACTGCAAGGT AAAGATACTT
CCGTCGGTTT CACAGCTGAT TGATGAATCT GTTGTCATGC AGAAAATAAG GGATGTGAAT
ATAGAAGACC TTTTGGGAAG GGAACCTGTA CATCTTGATA TTGAAGAGAT AGGTTCGTAT
CTGAAGGACC GGGTGGTAAT GGTTACCGGG GGAGGAGGCT CAATCGGTTC GGAGCTGTGC
AGGCAGATAG CGAATTTTTT GCCGAAGAGG CTTGTTATTT TGGATAATTA TGAAAACAAT
GCATATGACA TACAGAATGA ACTTTTGTAC AAGCATCCGG ATTTAAAGCT TGACACAGTG
ATTGCCAATA TCAGAGAAAA ACAGAGAATG GAAAACATAT TTAAAAAATA CAGGCCAGAC
GTTGTATTTC ATGCTGCGGC CCATAAACAT GTCCCTCTTA TGGAGGACAA TCCTACGGAG
GCGATAAAAA ATAATGTGTT TGGCACCTTA AATGTGGCTG AATGTGCGGA CAAGTATGGA
ACTAAAAGGT TTGTACTTAT ATCCACGGAC AAGGCCGTCA ACCCTACGAA TATTATGGGT
GCGACAAAAA GAATTGCAGA AATGATTATC CAGGCGATGA ATGAAAACAG CAAAACCGAG
TTTGTTGCGG TAAGGTTTGG AAACGTGCTT GGAAGCAACG GAAGTGTTGT ACCACTGTTT
AAAAAGCAGA TAGAAAGGGG AGGACCGGTA ACGGTCACCC ATCCGGAAAT CACCAGATTC
TTTATGACAA TTCCGGAGGC TGTGCAGCTG GTACTACAAG CTGGGGCAAT GGCAAAGGGC
GGAGAAATAT TTGTTCTTGA TATGGGTGAA CCTGTGAAAA TAAGTGAGCT TGCCCGAAAC
TTGATAAGAC TTTCGGGTTT TGAGCCGGAT GTCGATATAA AGATTGAGTA TATAGGTTTG
AGACCCGGCG AAAAGCTTTA TGAGGAACTT ATGCTCAGTG AGGAAGGGCT TTTGGCAACC
AAAAACGACA AAATATATGT TACAAAGCCT GTTCATATTG ATTTTAAGGT GCTCCAGAGG
GAGCTGGATT GCCTTAAGGA TATTATGGTT ACAAATTCTG AAGAGATTTC AGAATATATT
AAACTTATTG TGCCTACGTA CAAGAAAGCG GGAAACGGAA ATTAA
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| Protein sequence | MKQKIRANGL IAIDVFLVNI SLVIAYLLRF DLNYANIPER FIEPLVKLAV ISTVVKLITY
AVMKLYNSLW KYAGIYEVVM VIAASFISNS IMISYVFLSQ TPVPRSIFLI CILTDIALIG
GVRFAYRVFR RIVKGEMIRF TNSKRVLIAG AGDAGAIIVK EMKSHPKLKS TPVAFVDDDK
YKIGKKISGV PVVGETKDVS EIIQKLQIDE VIIAMPSASH KKINDIYTGC AQTNCKVKIL
PSVSQLIDES VVMQKIRDVN IEDLLGREPV HLDIEEIGSY LKDRVVMVTG GGGSIGSELC
RQIANFLPKR LVILDNYENN AYDIQNELLY KHPDLKLDTV IANIREKQRM ENIFKKYRPD
VVFHAAAHKH VPLMEDNPTE AIKNNVFGTL NVAECADKYG TKRFVLISTD KAVNPTNIMG
ATKRIAEMII QAMNENSKTE FVAVRFGNVL GSNGSVVPLF KKQIERGGPV TVTHPEITRF
FMTIPEAVQL VLQAGAMAKG GEIFVLDMGE PVKISELARN LIRLSGFEPD VDIKIEYIGL
RPGEKLYEEL MLSEEGLLAT KNDKIYVTKP VHIDFKVLQR ELDCLKDIMV TNSEEISEYI
KLIVPTYKKA GNGN
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