| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2294 |
|---|
| Symbol | |
|---|
| ID | 4809883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2726779 |
|---|
| End bp | 2728263 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640107700 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001038689 |
|---|
| Protein GI | 125974779 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGA TGGCTCAATT AGAGGATATC AGAAAAATGT ACTTCATGGA AGGCTTAAGT
ATCAGGGAAA TTAACAGGAG GACTGGGATA CATAGGGATA CAATCTCAAA ATATATTTCG
CTGGAGGAAC CAAAACCACC TAAGTACAAG TTGACAAAGG AAAGAACGCA TCCGGTATTA
GGGCCGTACA TACCAATGAT CAAACAGATA ATAGAAGATG ATAAAACCAG ACACCGCAAA
CAACGCCATA CAGGGACAAA AATATTTGAG ACACTTAAAA AAGAAGGCTT TTCAGGCGGC
TACAACACTG TAATGGATTA CCTGAGAAAG GAATACCGAA AACAAAGGGA AGCTTTCCTG
CCACTGGAGT TCGAGTTGGG AGCATATGCA GAAGTAGATT GGACAGAAGC ATATTTTTAT
CTAAAAGGCA AAGAAACCAA GGCACATTTG TTTGTAATGA AGTTGAGAGG ATCAGGCGGA
TTCTACGTAA GAGCATACCC TTTTGAGAAA CAGGAGGCGT TCTTTGATGG CCATATCAAA
TGCTTTGAGT TCATGAACGG TGTACCATAC AAGATAGCAT ACGACAATCT GAAAACGGCA
GTGAAGAAGA TACTCGAAGG CAGCAACAGA GAAGAGCAGG AGCAGTTTAT CGCTTTACGA
ACCCATTACC TTTATGAATC TTCATTCTGC CGGCCGGCAA AAGGGAGCGA TAAAGGTGGT
GTAGAGAATG CGGGCAAAGA GGCTGTGCGA AGGTTCTTCG TTCCCTACCC CGAGGTTGAT
TCATTTGAGG AGTTGAATGA ATATCTGCAC AACGAATGCA TAAAGCTTTT GGAAAGCAAT
CCGAAATGGG AAGCGGAAAG GGCAGCTTTG AGGCCATTAC CGGCGGTAAG GTTTGATGGT
GCGAGGTATA AAGAGGCAAA GGTCAACCGC TATTCTATGG TACAGTTTGA AACTAACCGA
TACTCTGTTC CCACGATATA TGTGGGAGAG AAAGTCACTG TTAAAGCTAC TGCGGATGAA
GTAAAAATAC TAAACAAAGG AACAATGATA GCAAGCCATC CAAGGATATA CGGACGCTAC
CAGGAGCAGA TAAAGCTTGA TCACTATCTG GAATTGCTGC TGCAAAAATC ACGCGCCCTG
GGCAACACAA AAGTATATAA ACCTCAGATG CTGGCACCCG TTTATGAGCA GTATCGTCGA
AGCTTAAATG CCAGAAGTCC GAGAGGCAAC AGGGAATTCG TAAAAATACT CATGCTGCAC
AGGGATTACC CTACGGCACT GGTGACAGAA GCTATTGAAA TAGCTATGGC ATACAATGTA
TACAGTTATG ACGGTGTATT TAACATATTA GGACAGCTAC TGGTCTCAGG CAGTCCTAAG
ACGGCTCCTG TCAGCAAAGA CAAGCTTCAG GGCATCCCCG AGGTTGTTGT AATACCTCCT
GATCTCAGCA AATACAGCGC TCTCATGTCA GGAGGTGGAC AATAA
|
|---|
| Protein sequence | MIKMAQLEDI RKMYFMEGLS IREINRRTGI HRDTISKYIS LEEPKPPKYK LTKERTHPVL
GPYIPMIKQI IEDDKTRHRK QRHTGTKIFE TLKKEGFSGG YNTVMDYLRK EYRKQREAFL
PLEFELGAYA EVDWTEAYFY LKGKETKAHL FVMKLRGSGG FYVRAYPFEK QEAFFDGHIK
CFEFMNGVPY KIAYDNLKTA VKKILEGSNR EEQEQFIALR THYLYESSFC RPAKGSDKGG
VENAGKEAVR RFFVPYPEVD SFEELNEYLH NECIKLLESN PKWEAERAAL RPLPAVRFDG
ARYKEAKVNR YSMVQFETNR YSVPTIYVGE KVTVKATADE VKILNKGTMI ASHPRIYGRY
QEQIKLDHYL ELLLQKSRAL GNTKVYKPQM LAPVYEQYRR SLNARSPRGN REFVKILMLH
RDYPTALVTE AIEIAMAYNV YSYDGVFNIL GQLLVSGSPK TAPVSKDKLQ GIPEVVVIPP
DLSKYSALMS GGGQ
|
|---|
| |