| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2283 |
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| Symbol | |
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| ID | 4809872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2713629 |
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| End bp | 2718056 |
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| Gene Length | 4428 bp |
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| Protein Length | 1475 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640107689 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001038678 |
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| Protein GI | 125974768 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTCA AAAAAGATGT GGCTCTCAAA TTTGTGAAAA ATTCGGAACT TTCTGAGAAA
GTGTATAAAG CGGCTAGCTC TGCCAAAAAA CTCGATGAAA GGCTAAAGGA TTTGTCCAAT
ATCACTGAGC AGGTTGCAAA AGGTGCAAAT GAACAATCTT CAGCCGTTGA TTCAACAAAC
TCAATGACGG AAAGACTTTC ACAGTCAATT AACGGTGTTG TTAAAAATGC CGAAAAGCTG
AAGGAGCTTG CCGGACAGTC CAAAAAATCC CTTGAAGATA TGGTTGTTGT AATAAAGCAA
GTTGCAGGAA ATAGTGAAAG TACCGCAAAG TCGGTAGAAG AAATATCTGT CTCCATTGAG
CAGATGGGAA AATCAGTCAA AGGTGTTGCC GGTAATGCTG AAAGCCTGAC GCGTTCTGCC
GAAGAAATGT CGGCGGCCAT ACAGGAGATA GTCGGCTCCA TTCAACAGGT GGCAGGTAAT
GCCGAAAGTA CTGCAAGTTC TGTTGAGCAA ATTTCATCTT CTATTGAACA GATGGGCAAA
TCAATAAAGG GTGTGGCAGG AAATGCCGAG AGTCTTACCG GTTCAGCCAG AGAAGCTACA
GCGGCGGTTC AGGAAATGGC CGCTTCCATC CAGCAGGTAG CGGGAAACAG TGAAAGTACC
GCAAACTCCA TAGAACAAAT ATCGTCTTCC ATAGAGCAGA TGGGAAGATC TATCAATGGA
GTTGCCGTAA ATGCGGAGAG TCTTTCAAAT TCGGCGGCGG AAGCAACAAA TGCCATTCAT
TCAATCGTTG CGTCAATCCA ACAGGTAGCG GGAAATGCCG AAAGTACTGC AAGCTCCATA
GAGCAGATAT CATCTTCCAT AGAGCAAATG GGTAAATCCA TCAAAGGAGT GGCAGGCAAT
GCTGAAAGTA TGTCAGGATC GGCACAGGAA GCATCAGCAG CGATACAGGA GATTGTAGCG
TCAATCCAGC AGGTGGCGGG AAACAGCGAA AGCACATCAA GCTCCGTAGA ACAAATATCA
TCTTCCATAG AGCAAATGGG TAAATCCATC AAAGGAGTGG CAGGAAACGC CGAAAGTCTG
AAAGGTTCGG CTGATGAAGC GACGGCGGCG ATACAGGAGA TAGTTGCGTC CATTCAACAA
GTGGCAGGCA ACGCGGAAAG TACTGCAAGC TCTGTAGAGC AGATTTCATC GTCTATTGAA
CAGATGAGTA AGTCCATCAA AGGTGTGGCA GGTAATGCTG AAAGTTTGAC GGGTTCGGCG
GAAGAAGCGT CAGCAGCGGT GCAGAAAATA ATAAGTTCCA TCCAGCAGGT GGCAGGAAAC
AGCGAAAGTA CGGCCAAATC GGTTGAAGAA ATCGCTTTGT CTATTGAAAA AATGGGCAAA
TCCATACAGG GAGTAGCCGC AAACGCCGAG AGTTTAAAAG GTTCGGCAGA TGTATCTGCT
GCTGCGATAC AGGAGATAGT TGCGTCCATC CAGCAGGTGG CAGGTAACGC AGAGAGCACG
GCAAGTTCTG TGGAGCAAAT ATCATCTTCC ATAGAGCAAA TGGGAAAATC CATAAAAGGT
GTTGCAGGCA ATGCCGACAG CCTAAAGGGT TCGGCAGACG AATCCGCTGC TGCAATACAG
GAAATGGTGG CATCCATCCA ACAGGTATCG GACAATGCTG AAAGCACAGC AAGTTCCATA
GAGCAAATAT CCTCTTCCAT AGAACAGATG GGTAAGTCCA TCAAAGGTGT GGCAGGCAAT
GCAGAAAACC TGAAAGTTTC TGCTGACGAG GCGTCGGCGG CAATACAGGA AATTGTGGCT
TCCATTCAGC AGGTGGCCGG CAATGCGGAA AGTACAGCCC AGTCGGTTGA AGAAATATCT
TCTTCGATAG AAGAAATGGG CAAATCAATC CAAGGTGTTG CCGGAAATGC CGAACAGCTT
CAAAAATCCG CCCATGAAAC ATCCCAAGTG GTTGAAAACA TGGCGGCTTC TATAAGCCAG
GTTGCCCAGA ATGCGCAGAA TGTAAATAAG TTAAGTGAAA AAGTGAGAAG TGATGCCATA
GAGGGTCAAA AGGCAGTGGC TGACACATTG GTGGCTATTA AAGACATATC GGAAGTTATT
CATCGTGCGG AGGATGTTAT AAATGGCCTT GGGAAGAGCT CCGAAAAAAT AGGCAGTATC
ATCGAAGTCA TTGATGATAT TGCCGAGCAG ACAAATCTTC TTGCACTGAA CGCGGCCATT
GAGGCTGCAA GGGCCGGAGA ACACGGCAAG GGATTTGCGG TTGTTGCCGA CGAGGTGAGA
AAGCTGGCTG AACGGACTGC TACGGCAACA AAGGAAATAT CTGAACTCAT AAAAGGTATT
CAGGGGGAAA CAAGTCAGGC CATCAAGGCT ATAGAAGTTG GTACTCAAAA GGTCGAACAT
GGTTCAAAGT TAAGTGACGA GGCGGGCAAA GCCATTGAAA AGATAGTTGA GGGAATAGAA
AATGTAAATA TGGAAATCCG TCAGATAACT GCCGCCACCG AAGAACAGAA CAAGGGCAGC
ATGAAGATTA TTGAAGCTGT GAACATGGTG ACAAATCAAG CATCGCAGGT AACCCAGGCT
ACCAAAGAAC AGGCGGCGAG TGTGGAAAAC ATAGTAAAAG GAGTAGCCAA TGCGAGGGAG
CAGGTAAGAC AGGTCACTGT GGCGGTAAAG GAACAGGCAA AACAGGGTCA AAATATTATA
ACTGCCGTAG AAAATGTGAA CAATCAAGCG GCACAGGTAA CCCAGGCTAC CAAAGAACAG
ACAAAAGGTG CTGAAGAAAT CATTAAAGGT GTGGCAAATG CCAGAGAACA GGTACGGCAG
GTTACTGTTG CGGTGAAAGA GCAAGCGAAA CAAGGCCAAA ATATTATACA GTCCATTGAA
AATGTCACAC AGCAAACAGC TCAGGTTGCC GCTGCCGTAA AAGAACAGAC TGTCGGTGTT
GAGGAAATAA TAAAAGGTGT GGCCAATGCC CGCGAGCAAA TAAGACAGGT TACGGCAGCG
ATGAAAGAAC AGGCAAAACA AAGCCAGACC ATAGTGGTTG CTGTGGAAAA TGTGACCAAA
CAGGCTGCAG AGGTTACTCA GGCAACCAAA GAGCAGGCTA AAGATGTTGA AGACATAATA
AAAGGCATAG AAAATGCAAG AGAACAGATG AGACAGGTTA CCGTTGCAGT GAAGGAACAG
GCGGAACAGG GTCAGAACAT AGTAACGGCG GTAGAGAATG TGACAAGACA GGCAGCACAG
GTGACGGATG TAACCAAAGA ACAGGCAAAG GCCGTTGAGG ATATTGTAAA GGGTATTGAA
AACTCCAGAG AACAGGTAAG ACAAATATCG GCTGCGGTGG CAGAACAGGC AAAACAAGGA
CAGAATATTG TAGCTGCAGT GGAAAATGTG AACAAACAAG CGGCGCAGGT GGCACAGGCC
GCCAGGGAGC AAACCCAAGG TGTTGAGGAA ATCATCAAAG GTGTGGCAAA TGCCAGGGAA
CAGGTAAGAC AGATTTCGGC AGCAGTAAAG GAACAGGCAA AGCAGGGACA AAATATTGTG
ATTGCGGTGG AAAATGTAAC CAATCAGGCA TCGCAGGTAA CCCAGGCAGC CAAAGAGCAG
GCTCAAGGAG TCGAACAAAT TATCAAGGGT GTGGTAAATG CCCGGGAACA GGTAAAACAG
GTTACTGCTG CAGTAAAAGA GCAGGCTTTG CAGGGACAAA TTGTCATTAA AGCCGTGGAG
AATGTCACCA ACCAGGCTGC TCAGGTTACA CAGGCTGTAA AAGAACAGGC GGCAGGAGCT
GAGGAAATTA TCAGGAACGT TGCAAATGCG AGAGAACAGG TACGCCAGAT TACTGTTGCC
GTCAAAGAAC AAGCCAGGCA GGGACAAGAC ATTACTGCAT CTGTCCAAAA TGTCACCGAC
CAGGCGGCAC TTGTGTCAAA TGCAGTAAAA GAGCAGACTC AAGGTGTTGA AGACATAATA
AAAGGCATTG ATAATGCAAG AGAGCAGATG CGTCAGGTTA CCGCCACAGT AAAAGAGCAG
GCTAAACAGG GACAAAATAT AGTTACCGCC GTTGAAAATG TTGCGAGCCA GGCAGCTCAG
ATTACAAATG TGACAAAAGA ACAGGCCAAT GGTGTCGAGA ATATAATTAG AAGTGTTGCA
AATGCCCGTG AACAGGTAAA ACAGATTACG GCAGCCATGA AGGAACAGGC AGTAAATGCG
GACAGGGTTA TTAATAACGT TGAAGGTGTA AGCATTCAGG CATATGAAGT GGCTGACGCT
GCCAAAGTTC AGGCAAATGA GGTGGAACAG CTGGCTAAAT ACACATCCGA AATAGATCGT
GTTATAAACC TCAATATCAA GGATGTTGAG CGTACTTGTG CGGTGACAAA AGAATTGTCG
GAATACTCGG AAGATATTAT GGATGCATTA CAGGAACTGG CAAAATAG
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| Protein sequence | MGFKKDVALK FVKNSELSEK VYKAASSAKK LDERLKDLSN ITEQVAKGAN EQSSAVDSTN
SMTERLSQSI NGVVKNAEKL KELAGQSKKS LEDMVVVIKQ VAGNSESTAK SVEEISVSIE
QMGKSVKGVA GNAESLTRSA EEMSAAIQEI VGSIQQVAGN AESTASSVEQ ISSSIEQMGK
SIKGVAGNAE SLTGSAREAT AAVQEMAASI QQVAGNSEST ANSIEQISSS IEQMGRSING
VAVNAESLSN SAAEATNAIH SIVASIQQVA GNAESTASSI EQISSSIEQM GKSIKGVAGN
AESMSGSAQE ASAAIQEIVA SIQQVAGNSE STSSSVEQIS SSIEQMGKSI KGVAGNAESL
KGSADEATAA IQEIVASIQQ VAGNAESTAS SVEQISSSIE QMSKSIKGVA GNAESLTGSA
EEASAAVQKI ISSIQQVAGN SESTAKSVEE IALSIEKMGK SIQGVAANAE SLKGSADVSA
AAIQEIVASI QQVAGNAEST ASSVEQISSS IEQMGKSIKG VAGNADSLKG SADESAAAIQ
EMVASIQQVS DNAESTASSI EQISSSIEQM GKSIKGVAGN AENLKVSADE ASAAIQEIVA
SIQQVAGNAE STAQSVEEIS SSIEEMGKSI QGVAGNAEQL QKSAHETSQV VENMAASISQ
VAQNAQNVNK LSEKVRSDAI EGQKAVADTL VAIKDISEVI HRAEDVINGL GKSSEKIGSI
IEVIDDIAEQ TNLLALNAAI EAARAGEHGK GFAVVADEVR KLAERTATAT KEISELIKGI
QGETSQAIKA IEVGTQKVEH GSKLSDEAGK AIEKIVEGIE NVNMEIRQIT AATEEQNKGS
MKIIEAVNMV TNQASQVTQA TKEQAASVEN IVKGVANARE QVRQVTVAVK EQAKQGQNII
TAVENVNNQA AQVTQATKEQ TKGAEEIIKG VANAREQVRQ VTVAVKEQAK QGQNIIQSIE
NVTQQTAQVA AAVKEQTVGV EEIIKGVANA REQIRQVTAA MKEQAKQSQT IVVAVENVTK
QAAEVTQATK EQAKDVEDII KGIENAREQM RQVTVAVKEQ AEQGQNIVTA VENVTRQAAQ
VTDVTKEQAK AVEDIVKGIE NSREQVRQIS AAVAEQAKQG QNIVAAVENV NKQAAQVAQA
AREQTQGVEE IIKGVANARE QVRQISAAVK EQAKQGQNIV IAVENVTNQA SQVTQAAKEQ
AQGVEQIIKG VVNAREQVKQ VTAAVKEQAL QGQIVIKAVE NVTNQAAQVT QAVKEQAAGA
EEIIRNVANA REQVRQITVA VKEQARQGQD ITASVQNVTD QAALVSNAVK EQTQGVEDII
KGIDNAREQM RQVTATVKEQ AKQGQNIVTA VENVASQAAQ ITNVTKEQAN GVENIIRSVA
NAREQVKQIT AAMKEQAVNA DRVINNVEGV SIQAYEVADA AKVQANEVEQ LAKYTSEIDR
VINLNIKDVE RTCAVTKELS EYSEDIMDAL QELAK
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