| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2279 |
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| Symbol | |
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| ID | 4809868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2710027 |
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| End bp | 2710737 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640107685 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001038674 |
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| Protein GI | 125974764 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000181432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAATT TTGATAGAAA ACTGATTAAG TTCTGGGAAA TTTTTTATAA TAACAAAGGT
TATATCAAAG TTCTTGAAGG GCTTAAGAAT ACACTTTACA TTGCAATTTT GGGACTTGTG
ATAGGAATTA TCATTGGTAC GTTAATTGCT ACTGTCAAAG TGATGCCCAA ATACAAAAAA
TTACCCAGGA TACTAAATGC GATATGTGAT TTTTATGTTG GGCTATTCAG GGGAACACCG
GTTGTTGTGC AGCTCCTGGT GGCCTATTAT GTAGTTTTGC CCCTTCTTGG CATAAATTTG
TCCGCACTTA CCGTGTGCGT GCTGGTATTT GGTCTTAACA GCGGTGCTTA TGTTTCTGAA
ATAATGAGAA GCGGCATCAT GTCAGTAGAC CACGGTCAGA TGGAAGCAGG CCGGGCTCTG
GGCCTGAGCT ACCGCGTCAC AATGCTCAAA ATAGTTATCC CTCAGGCTGT TAAAAATATT
CTCCCCACTC TGGGAAATGA ATTTATAGCT TTGATTAAAG AAACTTCCGT TGTAAGTTTT
GTCGGTGCTG CCGATTTGTA TGTCGCTTTT AGTTATATAG GCACAAACAG TTATGAATTT
ATGGTTCCAT ACCTTGCAAT GGCGCTTATT TATATCGCAC TGGTTATGAT AATTGCATCT
CTCATAAAAG TAATGGAAAG GAGGCTCAGA AAGAGTGATA GACGTAATTA A
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| Protein sequence | MGNFDRKLIK FWEIFYNNKG YIKVLEGLKN TLYIAILGLV IGIIIGTLIA TVKVMPKYKK
LPRILNAICD FYVGLFRGTP VVVQLLVAYY VVLPLLGINL SALTVCVLVF GLNSGAYVSE
IMRSGIMSVD HGQMEAGRAL GLSYRVTMLK IVIPQAVKNI LPTLGNEFIA LIKETSVVSF
VGAADLYVAF SYIGTNSYEF MVPYLAMALI YIALVMIIAS LIKVMERRLR KSDRRN
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