| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2278 |
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| Symbol | |
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| ID | 4809867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2709129 |
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| End bp | 2709992 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640107684 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001038673 |
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| Protein GI | 125974763 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000861711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA GTTTTATTTT TACCGTTATA ATGCTGATGC TTTTTAGTCT TATCCTCGCA
GGTTGCAATT CGGACAGCAA AGTTTCAGGC GCCAAACGTG CCAAAGTTAT TGACATTCAG
TTAACCCAGG AGGAATATGC TTTTGGAGTT GATAAAAACC AACCGGAACT GCTTGCAAAG
GTAAATGAGT TTATTTCGCA AATCAAGTCC GATGGAACCC TTCAAAAAAT AAGCGACAAA
TATTTCAGTG ACGGGGAACC TGAACCTGTT ATATCTGCAG TGGAAGACAG CAGCAAAGAC
CAGCTTGTAG TTGCCACAAA TGCGGCGTTT GAGCCTTTTG AATATACTCT CGGAGGCAGC
GAGTATTACG GTATTGATAT GGAAATTGCC GCACTTCTTG CAGAATATCT CGGAAAAGAG
CTTGTAATCA AAAACATGGA CTTTGATGCC GTTTGCCTTT CCGTAGGCCA GGGAAAAGCC
GACATTGCAA TGTCCGGTCT TACGGTAAAA GAGGACAGGA AAGAGTATGT TACATTCTCG
GACACATATT ATAATGCTTC CCAAAAACTT ATTGTCAGAG AAGACGACAA TACATTTGAC
AACTGTAAAA CCGCTGCTGA TGTGGAAGCA ATTCTTTCAA GCTTAAGCAG TGATACAAAA
ATCGGTGTTC AGACAGGTAC AACCGGCCAA TTCTATGTTG AAGGCGATGA AGACTGGGGT
TTTGAGGGCT ATAATGTTAA ATGCGTAGGT TACAAGTCAG GCTCTCTTGC CGTTCAGGAC
ATGCTCAACG GCAACATTGA CTTTGTCATT ATTGATGAGG CTCCTGCCGA CAGCATAGTA
AGAGCAATTA ATGAGCTTAA CTAA
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| Protein sequence | MKKSFIFTVI MLMLFSLILA GCNSDSKVSG AKRAKVIDIQ LTQEEYAFGV DKNQPELLAK
VNEFISQIKS DGTLQKISDK YFSDGEPEPV ISAVEDSSKD QLVVATNAAF EPFEYTLGGS
EYYGIDMEIA ALLAEYLGKE LVIKNMDFDA VCLSVGQGKA DIAMSGLTVK EDRKEYVTFS
DTYYNASQKL IVREDDNTFD NCKTAADVEA ILSSLSSDTK IGVQTGTTGQ FYVEGDEDWG
FEGYNVKCVG YKSGSLAVQD MLNGNIDFVI IDEAPADSIV RAINELN
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