Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2271 |
Symbol | |
ID | 4809860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2700975 |
End bp | 2701511 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640107677 |
Product | cellulosome enzyme, dockerin type I |
Protein accession | YP_001038666 |
Protein GI | 125974756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00813708 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AAATTGCACT GTTAACGGTA GTTTTAATCG TTGCTATGGT AGTATTAGGC GGTTCTATGA CAGCATATGC AGGACATCAA TGCAGTGTGA CGGTAATTAT CGGTGATGTA AACTTGGATG GTTCAGTTGA CTCTATAGAT CTTGCATTAT TGTATAATAC AACATACTAT GCAGTACCTT TGCCAAATCG ATTGCAATAT ATAGCTGCAG ATGTAAACTA TGATTCCAGT TGTACAATGC TTGATTTTTA TATGCTTGAA GATTATCTCC TTGGAAGAAT ATCCTCTTTC CCGGCAGGTC AAACTTACAC AGTTTATTAT GGTGACCTTA ACGGGGACCA ACTGGTAACA ACAACCGACC AAAGCCTGCT TAGTGATTAC CTTCTTGGTA GAATTAATTT AACTTTTAGA CAATATGTTT CTGCAGATGT AAATGGTGAT GGTACGGTAG ATGGCATTGA TCTCGCAATT ATAACTGCAT ATATAAATGG TCAAATTCAG CATTTCCCGG TATGTCCGCA AAGCTAA
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Protein sequence | MKKKIALLTV VLIVAMVVLG GSMTAYAGHQ CSVTVIIGDV NLDGSVDSID LALLYNTTYY AVPLPNRLQY IAADVNYDSS CTMLDFYMLE DYLLGRISSF PAGQTYTVYY GDLNGDQLVT TTDQSLLSDY LLGRINLTFR QYVSADVNGD GTVDGIDLAI ITAYINGQIQ HFPVCPQS
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