Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2249 |
Symbol | |
ID | 4809987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2675408 |
End bp | 2677648 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640107655 |
Product | ATP-dependent RecD/TraA family DNA helicase |
Protein accession | YP_001038644 |
Protein GI | 125974734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000721338 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAATT TGGTAACTAT TGAAGGTACT GTTGAAGAAA TTATATTCTC CAATGAAGCC AATGGATATA CCGTTTGTGA GATAAAATGC GATAAAGAAG TTATTACCGT CGTGGGATAT ATGCCTTTTA TCAATGTGGG TGAGACGCTG AGAGTTTCGG GGAAGTGGGT CATCCACCCT GACTATGGCG AGCAGCTCAA AGTGGAGCTG TATGAAAAGC TGCTTCCGGA AACGCCGGAG GCTATAGAAA GGTATCTTGC GTCAGGGCTT ATCAAGGGAG TCGGCCCTGC AACCGCAAAA AAGATTGTAA AGAAATTCGC AGACCAAACT CTTCATATTA TAAGTCATCA CCCGCAGAGG CTTGCCGAGA TAAAAGGTAT TACCATGGAA AAGGCTTTGA GAATAGGACA GGCCTTTGAG GAGCAAAGAG GCCTTCGGGA TGTTGTGCTG TTTCTGCAGG AGTATGGCAT AAGTCCGACT TATTGTGCCA AAATATACAA GACTTTCGGA CCGGATACCA TAGAAGAAAT CAGGAAAAAC CCTTACCGGC TTTCAGACGA GATTTTCGGA ATAAGTTTCA GAACGGCTGA CCGGATAGCC AAAAGCCTTG GAATAGACCC TTACTCAAAA TACAGGATTT CAAGCGGTAT CAAATATGTG TTAAGCCGGG CCGCGACAGA AGGTCATACT TTTTTGGAAG AAGAGATGCT AAAAAGTTAT ACGTCAAAAC TTTTGGACAT CAACATTGAC AGCATTGAAG ACGCTCTCGT TTCCCTTGTG CTGAATAAGT CGGTGTATGT GGACAGAAAT GACGGGATGT CAAAGATATA TTTGAGTTCA TTTTACCATG CGGAGCTGGG AGTATGCAGA AAGCTGGTGG AACTTTCCCA GGTAAGGTAT AGCGCCGATA TGGAGGACTT TGAGGAAAGG ATAAAGCAGG TTCAGAAAAA AGAGGGTATA ATACTTGCGG ACAAGCAAAA GGAAGCCATC AGGGAAGCAA TGACTAACGG CGTGCTTGTC ATAACCGGAG GGCCGGGCAC AGGCAAGACA ACCATAATCA AAAGCATTAT AAGCCTTCTT GAAAGTGAAG GATATGAGTT TGCCCTTGCA GCTCCCACCG GCAGGGCGGC AAAGAGGATG TCCGAGGCTA CGGGCTATGA GGCAAAAACC ATTCACAGGC TCCTTGAGAT TGGTTATACC TCAAATGAGG ACGAGCTTGT GTTTATGAGG ACGGAAGACA ATCCCATAGA GGCTGATGTG GTGATAATTG ACGAGATGTC CATGGTGGAT ATAATTCTCA TGTACCACCT GCTTAAAGCT ATTGTCTGCG GAACAAGGCT TATACTGGTC GGAGATGTGG ATCAGCTTCC TTCGGTGGGG CCGGGAAATG TCCTCAGGGA TATAATAAAA AGTGGGATGA TCAAGACCGT AAAGTTGTCT GAAATATTCC GGCAGGCCGG AGAGAGTATG ATAGTTGTCA ATGCCCACAG GATAAACCGC GGAGAGCATC CTATATTAAA TGAGAGGGAA AAAGATTTTT TCTTTGTGAC AAGAAATTCC CAGAATGATA TTTTAAAAAC CGTGGTTGAT CTTTGTACAA GAAGAATACC CGATACTTAC GGATATGATC CCATGAAACA GATACAGGTA TTGTCGCCTA TGAGAAAGGG TACGGTGGGA GTGGCAAACC TCAATATTGA GCTTCAGAAG GTTTTAAATC CCGAAGACGG AAAAAAGAAA CAAAAAGCCT TCAGAAACTA TGTATTCCGT GAGGGAGACC GGGTGATGCA GATAAAAAAC AACTACAACC TCAGATGGGA AAAAATCAAC GGCCCGGGCC AGGAAGGAGC GGGTGTGTTT AACGGCGATA TGGGAATTAT AGTTGAAATA GATGATGAAG AGCAAAAAAT AAAGGTTTTG TTTGACGATG AAAAGCTTGT GGAATATGAT TACACTATTT TGGACGAGCT TGAGCCGGCC TATGCCGTTA CCATTCACAA AAGCCAGGGA AGTGAGTTTC CCGTGGTGAT ACTTCCGGTG TTTCCCGGGC CTTCGGTGCT TATGACCAGA AATCTTTTGT ACACTGCGAT AACAAGGGCG AGGGAGCTGG TGATACTGGT GGGCAATAAA GATTGTCTTT ACGGGATGAT TATGAACGAT CGGGAGACCA AAAGAAACTC GGATTTGGCT GAAAAACTTA GAAAATGCAT AGTGGGAGTG GACTGGTTGA AACAATGGTA A
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Protein sequence | MDNLVTIEGT VEEIIFSNEA NGYTVCEIKC DKEVITVVGY MPFINVGETL RVSGKWVIHP DYGEQLKVEL YEKLLPETPE AIERYLASGL IKGVGPATAK KIVKKFADQT LHIISHHPQR LAEIKGITME KALRIGQAFE EQRGLRDVVL FLQEYGISPT YCAKIYKTFG PDTIEEIRKN PYRLSDEIFG ISFRTADRIA KSLGIDPYSK YRISSGIKYV LSRAATEGHT FLEEEMLKSY TSKLLDINID SIEDALVSLV LNKSVYVDRN DGMSKIYLSS FYHAELGVCR KLVELSQVRY SADMEDFEER IKQVQKKEGI ILADKQKEAI REAMTNGVLV ITGGPGTGKT TIIKSIISLL ESEGYEFALA APTGRAAKRM SEATGYEAKT IHRLLEIGYT SNEDELVFMR TEDNPIEADV VIIDEMSMVD IILMYHLLKA IVCGTRLILV GDVDQLPSVG PGNVLRDIIK SGMIKTVKLS EIFRQAGESM IVVNAHRINR GEHPILNERE KDFFFVTRNS QNDILKTVVD LCTRRIPDTY GYDPMKQIQV LSPMRKGTVG VANLNIELQK VLNPEDGKKK QKAFRNYVFR EGDRVMQIKN NYNLRWEKIN GPGQEGAGVF NGDMGIIVEI DDEEQKIKVL FDDEKLVEYD YTILDELEPA YAVTIHKSQG SEFPVVILPV FPGPSVLMTR NLLYTAITRA RELVILVGNK DCLYGMIMND RETKRNSDLA EKLRKCIVGV DWLKQW
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