| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2243 |
|---|
| Symbol | |
|---|
| ID | 4809981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2670009 |
|---|
| End bp | 2671568 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640107649 |
|---|
| Product | flagellar hook-associated protein FlgK |
|---|
| Protein accession | YP_001038638 |
|---|
| Protein GI | 125974728 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1256] Flagellar hook-associated protein |
|---|
| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTT TCTTCGGATT TAACGTGGCA GTAAAGGGAT TGTTCACGGC TCAAAGAAAT
ATGGATATAA TAAACCACAA TATTAACAAC GTAAACACAC CGGGATATTC CAGGCAGGTA
GCGATTCAGT CGGCATCAAA CCCCATATCG CTCCTTAACG GAACGGGAAT GCTGGGTACA
GGCTCGGAAG TGCTTGCCAT TGAAAGAATA AGGGATGAAT ACCTTGATTA CAAGTACTGG
AGTGAAAACA TTTCTTACGG GGAATGGAAT GCCAAAAGGA CTCTTCTTGC CGATATGGAA
GTTACATTCA ATGAACCGTC GGACAGCGGA TTTAATGCTG TGATAAACAG TTTTTACAAT
TCTTTGCAGG AACTTGCAAA AGACCCCAGC AGCGATGCGA TCAGGGCTTT GGTAAAAGAA
CAGGGCGTAA CCTTTGCGCG CTACTTTAAC AACATTGCAT CCCATTTTGA AGAGCTTCAG
TTTGATATAA ACAATCAGGT AAAGACTGTT GTTACCGAGA TAAACTCATT AGGCACTCAA
ATAGCCCAGT TGAACAAGCA AATATACACT GCCGAGCTGG ACGGAAATAC TGCAAATGAC
TTAAGAGACA AAAGGACACT TTTGATTGAT GAGCTTTCAA AGCTTGTAAA CATAGATGTC
AACGAAGTAG TGGTGGGCAA ACTCCCCAAC GGCAAAGACG ACAAACGAAT GATAATTACG
ATCAGCGGAA AGGCTTTTGT AGACAACTTT GATGTCAACA AGCTCACCAT TAAGCAAAGA
GAGAATAAAC TGAATGAGGA AGAGGATATT CCAAATCTGT ACGAAGTTTT GTGGGAAGAC
GGCAACAGCC TTAGTGTCAG GGGCGGAGAG CTGAAAGGAC TGCTTGATGT TAGGGATGGA
AATGACGGAG AAAACGGAAG TCCCAACTAT AAAGGCATAC CCTATTACAT AAGGAAACTT
AATGAATTTG TCAGGACTTT TGCAATAGCA TTTAACGAAG GAATAGTGGG AAACGACAAG
GTGGCGGGTC ATGTGGACGG ATATGGCACC AACGGAAATA CAGGAATAAG ATTTTTCACC
ATATTGGGAG AGGAAAACAA ACCTATATCC AGTGCTGATT TCATGTCCGC CGGAGATATT
GACGCCTGCT ACGGGAAAAT GACCGCCAAA AACTTTACCG TAAGTAGCGA CATTCTGGAT
GATCCAAGAA ACATTGCAAC AGCTGATACA AAGGATCAGG TCGGGAACAT AGGAAATATA
AACAGTATCC TGGCTATGAG AAATAACGTC CATATGTTCA AGGAAGGTGC TCCGGAGGAC
TTTGTAAAAT CTGTTATTAC AACTCTGGCG ATAGATTCTC AGCAAACTAT AAGGCTTTCG
TCAATCCATA AAAATATGAT TGAACAGGTT GAAAATCAGA GGATGTCTGT GTCAGGGGTG
TCTTTGGACG AAGAAGTGGC AAATCTGGTA AAGCACCATC AGGCTTATGC GGCGGCCGCA
CAAATGATTA ATACCATGGC GGAAGTTTAC GACATACTGA TTAACAGAGT AGGTCTTTGA
|
|---|
| Protein sequence | MSSFFGFNVA VKGLFTAQRN MDIINHNINN VNTPGYSRQV AIQSASNPIS LLNGTGMLGT
GSEVLAIERI RDEYLDYKYW SENISYGEWN AKRTLLADME VTFNEPSDSG FNAVINSFYN
SLQELAKDPS SDAIRALVKE QGVTFARYFN NIASHFEELQ FDINNQVKTV VTEINSLGTQ
IAQLNKQIYT AELDGNTAND LRDKRTLLID ELSKLVNIDV NEVVVGKLPN GKDDKRMIIT
ISGKAFVDNF DVNKLTIKQR ENKLNEEEDI PNLYEVLWED GNSLSVRGGE LKGLLDVRDG
NDGENGSPNY KGIPYYIRKL NEFVRTFAIA FNEGIVGNDK VAGHVDGYGT NGNTGIRFFT
ILGEENKPIS SADFMSAGDI DACYGKMTAK NFTVSSDILD DPRNIATADT KDQVGNIGNI
NSILAMRNNV HMFKEGAPED FVKSVITTLA IDSQQTIRLS SIHKNMIEQV ENQRMSVSGV
SLDEEVANLV KHHQAYAAAA QMINTMAEVY DILINRVGL
|
|---|
| |