| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2239 |
|---|
| Symbol | |
|---|
| ID | 4809977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2667730 |
|---|
| End bp | 2667957 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640107645 |
|---|
| Product | carbon storage regulator, CsrA |
|---|
| Protein accession | YP_001038634 |
|---|
| Protein GI | 125974724 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.3862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGTTC TGACGAGAAA GAAAAATGAA TCCATAATTA TTAATGACAA TATTGAGATT
ACTGTTGTTG ACATTCAAGG GGAGCAGGTG CGTATCGGCA TTAATGCGCC GAAAAGCATA
TCTATTTACA GGAAGGAGAT ATACCTGGAA ATACAGGCTG AAAACAAAAA GGCTGCGGAA
ATTAAGAATG TGGATCTGAA GGAGGACTTA AAGGATTTTT TGAAGTAA
|
|---|
| Protein sequence | MLVLTRKKNE SIIINDNIEI TVVDIQGEQV RIGINAPKSI SIYRKEIYLE IQAENKKAAE
IKNVDLKEDL KDFLK
|
|---|
| |