Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2190 |
Symbol | |
ID | 4810906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2608713 |
End bp | 2609894 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640107596 |
Product | N-acetylglucosamine 6-phosphate deacetylase |
Protein accession | YP_001038585 |
Protein GI | 125974675 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA TGAAGCTTGT AAAAAACGGA CTTGTTTTAG ACAGTCAAAA AGGTTTTGAA GTAAATGATA TATTGATTGC CGGTGGGAAA ATTGCAAAGA TTGGTAAGAA TATTGAAGTT TCGGAAACGG ACTATGAAGT CCTGAATGCT GAAGGCTTTT ATGTTGTTCC GGGATTTATT GATGTACACA TGCATGGAGC GGCAGGTGTC GATATTATAA AGGCAGACCC GGGCCGGTTA AATGAGCTGT CTTTGTTTCT TGCATCCAAA GGAGTTACGT CTTTTCTTGC TACAGTTATG ACTGATTCCA GGGAGAATAT CTGCCGTGCC GTTGAGAATA TCCGTCTTGC CGTGGAAAGA GGATTGGATG GTGCCAAAAT AGCCGGCATT AACCTGGAGG GGCCGTTTAT AAACCCAAAA TACAGGGGAG CTCACCCGCC GGAATATATA CTGGAGCCTG ATGTGAAATT AATCGATGAA CTTGTTGAAA AATCAGGAAA TAATATAAAG CTTGTTACGG CTGCGCCTGA ATTGGACAAA ATTGAGGAAA TTATCCGAAA GTTCAAAGAA GACATAATTT TTAGTGCGGG ACATTCCGGT GTTGATTTTG CCGGGGCGAA AGAAGCCTTT AAAAATGGTT TTAAACATGT CACTCACCTT TTTAATGCAA TGACAGGTAT TCATCACAGG GAGCCGGGGC TTGCAGGAGC GGCGTTGGAC AGCGACGATG TCACTGTGGA AATAATTCCC GACCTGATAC ATGTGCATGG AGCGGTAATT CAAATGGTTG TCAAGTGTAA AACACCGGAC AGGGTGGTTC TTGTAACCGA TTCTATTTTG GCGGCCGGAC TCGGAGAGGG AAAACTTGAG TTTGCAGAAA GCATGATTAC AGTTAAAGAC GGTGCGGCCG TTTTTGAAAA CGGTGTGTTG GCCGGAAGTA CCATTACGAT GGCAGACGGT ATCGGAAATA TGGTGAAAAA ATTGGGATTC AGCCTTGAGG ATACAATAAA AATGGCTTCA ACAAATCCTG CCAAACTTAT AAACATTTTT GACAGGAAGG GAAGCCTGTC AGAAGGAAAA GATGCAGATA TTGTAATATT GGACAGAAGT CTGAATATCC ATGAAACAAT AATACAGGGA ATTACGGTTT ACTCTACATT TCCATACCCT CAGAGTAGGT GA
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Protein sequence | MEKMKLVKNG LVLDSQKGFE VNDILIAGGK IAKIGKNIEV SETDYEVLNA EGFYVVPGFI DVHMHGAAGV DIIKADPGRL NELSLFLASK GVTSFLATVM TDSRENICRA VENIRLAVER GLDGAKIAGI NLEGPFINPK YRGAHPPEYI LEPDVKLIDE LVEKSGNNIK LVTAAPELDK IEEIIRKFKE DIIFSAGHSG VDFAGAKEAF KNGFKHVTHL FNAMTGIHHR EPGLAGAALD SDDVTVEIIP DLIHVHGAVI QMVVKCKTPD RVVLVTDSIL AAGLGEGKLE FAESMITVKD GAAVFENGVL AGSTITMADG IGNMVKKLGF SLEDTIKMAS TNPAKLINIF DRKGSLSEGK DADIVILDRS LNIHETIIQG ITVYSTFPYP QSR
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