| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2182 |
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| Symbol | |
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| ID | 4810898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2599446 |
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| End bp | 2602235 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640107588 |
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| Product | Ig-like, group 2 |
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| Protein accession | YP_001038577 |
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| Protein GI | 125974667 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.951381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACA TAAGAAAAAG CATTTCCATC TTTGCAGTTT TGGCTCTTGT TTTTATTCTT
TCATTTGGTA ATGTCAGCGC CGGTACTATT TATGAATCAA AAACAAAAGA AACAGTCACT
TCCGGTGTGA CTTTGGAAAC CATCACAAGA TTTACCGATG ACGGATGGCA GAAAATCAAC
GTACTCAGGG TTGACCTTGA GAACCCGAAC GTCAAAGTTG ACACTTTGAT TGATTCTGAG
TCCATAAAAA AGCTTACCAA TGTAAAAAAT CTGGCACAAT CAGCCGGTGC AGTGGCTGCT
GTAAACGCCG GCTTTTTCAA CTGGCTGAAA GGTGAATCCG GAAAGGGTTA TCCCGACGGA
CCCGTAATAA AATCAGGGGA ATTTCTGTCT GTGGATTCCG AATACAACAG ATACAACAAT
TCCATGGCAA CCATAGCCAT CGACAAAGAC AACAATGTGT ATTTTGATTT TTGGAAAACG
GACATAACTC TGCATGCTCC GGACGGAAGC ACAACCAGAG TTTTTCAGTA CAATAAACCC
AGTCCTTTCC AATATACCGA CATAACCATC TGGACCAGTG CCTGGGACAA ATATTCTTTA
GGTGTATCCC AGCAATATCC TGACTTGGTG GAAGTAGTGG TCGACAACGG CACTGTTGTG
GAAATCCGTC AGGGACTTCC CGCCGTTGAA ATTCCGCAGA ACGGTTATGT AATTATATCA
AGAGGTGCAA ATGCGCAGTT TCTTCTGCAG CACTTTAAAG TGGGAGATCC CGTGGAAATC
TCATTTTCCA CCGTATTGGA CTGGCAAAAG ATTGAAATGG CTGTAACAGG CAGCGCCATT
CTCGTTAAAG ACGGCCAAAT ACCTGAAAAA TTCTCCTATG AAATCTCCGG AGTTCATCCC
CGTACTGCCG CAGGAACTTC AAAATCCGGC AAGGAATTAA TACTTGTAAC TGTTGACGGT
CGTCAGGCAG CAAGCAAGGG TATGACCCAG CGGGAGCTGG CAAATTTAAT GTTGAGCCTC
GGAGCCTATA ATGCCATAAA TCTCGACGGC GGCGGATCCA CTTCAATGGT TTCAAGAATT
CCGGGAACCA ATGACTTAAA AGTTGTAAAT ACTCCGTCCG ACGGGGCATT AAGAAGCATT
TCCACCGCCA TAGGCGTGTT CTCCGTTGCG CCTCCCTCCG AACTTGCAGG CATGATAATC
GAAACACAGC CCAATGTGTT TGTAAATTCG TCAACCACAT TAACCGTCAA AGGTTATGAT
AAATACTTCA ATCCTGTATC AGTCGACCCA AACAGCATCA ACTGGAGCGT TTCCGGTATC
AAGGGAAGCT TTGCGGGAAA TGTTTTCCGT GCTGAGTCTT CGGGTATCGG CACCATAACG
GCAACAGTAA ACGGAATAAA GGCAAGTACA ACCATACGGG CTTTGGAAGC ACCAAACAAA
CTTATTTTAA GCACCACAAA GCTCAATCTT TTGAAAGGAA GTTCATATTC TTTTACCGTC
AAGGGCGTTG ACAACAACGG CTACAGTTCA TATATAAATT TTGCTGACAT CAACTGGACA
GTCAATGGAG ATATAGCAAC CATTGAGAAA AATAAAATTA CTGCCGTAAA ACCCGGCACC
GGATATATAG AAGCTGCTTT CGGCGATGCC CGGGCCTATT GTGCCGTATC GGTTGCATCG
GAGTCTACGT ACCTTGTAGA CGATTTCGAA AAGAAAAACG GTTCATTTGA AACCGTGCCT
GCGAATTTGC CGGGAAGCTA TGAACTTTCT TCAGAAGTAA AAAAATCAGG CAATTACTCC
GGGAAACTCA GTTATGACTT TTCATATCTC GAGGGTACCA GGGCTGCATA CCTGGTGTTC
CCCAACGGAG GCATTGACCT TGACGGCAAC ACTGTCGAAA TTACCATGAT GGTAAACAAT
CCCCAGCAAA ACCCCAATTG GCTTAGAGCG GAAGTAATTG ACTCCGGCGG TCAAAAGCAT
CTTGTTGATT TCACCAGGGA CCTTACCTGG ACCGGATGGG GCCGGGTATT TGCTTCACTG
AGAGACATTA AGTCTCCGGC CAAGCTTACA AAAATATATG TTGTTCAGGT CAATCCTGTA
CCTTCTTCCG GTTGTATTTA CATTGACGAC CTCAGTTTAG TCAAGGCAAC CTTCCCGGAA
ATTAACGAAA GCACCATTCC AAAAGACGTT GTTCTTTCCG ACAGGGACAA CAAAGAGGCA
GCTTTGAACA AAGATTCAAT CAAAATCTCC GTTTTTTCCG GAAAAAGCAA CCCCGAAAAC
ATGTTGCAAA AGCTTTTAAA CACAAAATTC TACAACAAAG TTAAGGCTGA CGGTTACATG
AAAAGCATTC AGGACATCTC AAACATAAAC ACCAATACCC ACGTGGATAT AGGCGGGACC
CGACTGATTA CGCTCAACAC TACTGATAAA AGCATAAGAA CAAGTGCTTC AGGCCAATGG
CAGTGGTTCT TTGACAAGCT TAATTCCCAC ACGGGAGATA ATATATTCAT ATTTATGAAA
AACTCTCCGG ATACATTCGT TGACCCGCTG GAAGCAAAAT TGTTCAAGGA TATCCTGATT
GAACACAAAG AAAAAACCGG AAAGAATATT TGGGTCTTCT ATGGCAACAG CTCTGAAACA
TACTATGCCG ACAACGGAAT TAAATACTTT GGTGTTGCAG GATTAAACAT TGGCGGGCTT
ACTCCCGACA ATGCGAAAAA CGTAAAATAC ATTGAAATAA CTGTAAATGG AAAAGAAGTA
AGCTACCAAT ACAAATCTCC GCTTAAATAA
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| Protein sequence | MKYIRKSISI FAVLALVFIL SFGNVSAGTI YESKTKETVT SGVTLETITR FTDDGWQKIN
VLRVDLENPN VKVDTLIDSE SIKKLTNVKN LAQSAGAVAA VNAGFFNWLK GESGKGYPDG
PVIKSGEFLS VDSEYNRYNN SMATIAIDKD NNVYFDFWKT DITLHAPDGS TTRVFQYNKP
SPFQYTDITI WTSAWDKYSL GVSQQYPDLV EVVVDNGTVV EIRQGLPAVE IPQNGYVIIS
RGANAQFLLQ HFKVGDPVEI SFSTVLDWQK IEMAVTGSAI LVKDGQIPEK FSYEISGVHP
RTAAGTSKSG KELILVTVDG RQAASKGMTQ RELANLMLSL GAYNAINLDG GGSTSMVSRI
PGTNDLKVVN TPSDGALRSI STAIGVFSVA PPSELAGMII ETQPNVFVNS STTLTVKGYD
KYFNPVSVDP NSINWSVSGI KGSFAGNVFR AESSGIGTIT ATVNGIKAST TIRALEAPNK
LILSTTKLNL LKGSSYSFTV KGVDNNGYSS YINFADINWT VNGDIATIEK NKITAVKPGT
GYIEAAFGDA RAYCAVSVAS ESTYLVDDFE KKNGSFETVP ANLPGSYELS SEVKKSGNYS
GKLSYDFSYL EGTRAAYLVF PNGGIDLDGN TVEITMMVNN PQQNPNWLRA EVIDSGGQKH
LVDFTRDLTW TGWGRVFASL RDIKSPAKLT KIYVVQVNPV PSSGCIYIDD LSLVKATFPE
INESTIPKDV VLSDRDNKEA ALNKDSIKIS VFSGKSNPEN MLQKLLNTKF YNKVKADGYM
KSIQDISNIN TNTHVDIGGT RLITLNTTDK SIRTSASGQW QWFFDKLNSH TGDNIFIFMK
NSPDTFVDPL EAKLFKDILI EHKEKTGKNI WVFYGNSSET YYADNGIKYF GVAGLNIGGL
TPDNAKNVKY IEITVNGKEV SYQYKSPLK
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