Gene Cthe_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2167 
Symbol 
ID4810880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2577170 
End bp2578312 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content38% 
IMG OID640107570 
Productglycoside hydrolase family protein 
Protein accessionYP_001038562 
Protein GI125974652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT TTTATTTGGG GCTTGTTGTC ATTGTTTCTT TTGTTCTCAT GCTCGGAGGC 
ATAATTTACA GCCGGAGATT TGGAAACGGA CTTTTAACTG ACGCATCCGG CATATTTTTG
GACGGAGATT TCCAAAGAAA TAAGTACGGG GAAAAAAAAC ACATCCTTTT AAAATTTATA
AAGAGCCGTC TGATGGATTC TGAAGGAGGA ATCACAACGA ACACCCACCC GAGTATGGGA
GATTCAAACA CTTTGTCGGA GTCAACAGGC ATACTTATGG AATGCGCTCT TATAAACAAC
GATAAGAATT TGTTTGACAT GGAATACCGG TATATTAAGG TAAATCTTGT AACTGAGAAC
TTCTTTATAA AATGGAAAGA GGGAAATGAC GTTTTCTGCA ATGCTTCCAT AGATGATTTA
AGGATTATTG GCGCGCTTCT TGAAGCATAT GAAAAGTGGG GGGAAAAAGA TTATAAAAAT
TTTGCACTTT TGCTGCAGAA AAAAATATAT GATGTCCAGG TAAAAGACGG AAGTCTTTAT
GAGTTTTTTG ACTGGAAGTA CAACATTCCA AAGACTTCCA CTCCTTTGTG TTATTTAAAT
TTGAAAGTAA TAAAAAAATT GCAGAAATAC AATAAAGGCT GGAGAAAAGT ATATGATAGA
AGTTTGAATA TCATTAAGAA AGGGAAGATT GAGACTTCAC CTTTATTTTA CAAATATTTT
GACTACAACC TTGGCAGGTA TTCTTTTGAT GAAGAGTATC AGGAAAAGGG CGGAATATGC
CTGGTGTATA CCCTTTACAC CGCTCTTTCC ATGGCAGAGG CCGGCATTTT CGATGATGAA
CTCCTAAACT GGCTTCGAAA TGAGATGGAA AAAGGTAAAG TATATGCATG GTATAATCCG
TACAGCCAAA AACCTGTGTC CGATATGGAA AGCACGGCAG TATATGCTTT GGGCTCGATT
TTTGCCGGAC TTTCGGGGGA TGAAGTGCTT TCTCAAAAAC TTTTGGACAG AATGCTTGAG
TTTATGGTGA CCGATGAAAA TTCCCAATAT TACGGAGGAT TTGGGAACAG TGAGACAGGA
GAATTTTATT CCTTTGACAA TCTTATGGCA CTAAAAGCAC TGGCTTTGGC CGAGAAACCG
TGA
 
Protein sequence
MKRFYLGLVV IVSFVLMLGG IIYSRRFGNG LLTDASGIFL DGDFQRNKYG EKKHILLKFI 
KSRLMDSEGG ITTNTHPSMG DSNTLSESTG ILMECALINN DKNLFDMEYR YIKVNLVTEN
FFIKWKEGND VFCNASIDDL RIIGALLEAY EKWGEKDYKN FALLLQKKIY DVQVKDGSLY
EFFDWKYNIP KTSTPLCYLN LKVIKKLQKY NKGWRKVYDR SLNIIKKGKI ETSPLFYKYF
DYNLGRYSFD EEYQEKGGIC LVYTLYTALS MAEAGIFDDE LLNWLRNEME KGKVYAWYNP
YSQKPVSDME STAVYALGSI FAGLSGDEVL SQKLLDRMLE FMVTDENSQY YGGFGNSETG
EFYSFDNLMA LKALALAEKP