| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2163 |
|---|
| Symbol | |
|---|
| ID | 4810876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2573866 |
|---|
| End bp | 2574201 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640107566 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001038558 |
|---|
| Protein GI | 125974648 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0395828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTG AAAAAAAAGA GGTGGACGGG GTTAAAATTG TAAAGCTTAC AGGGCAGATA
AGGATTTCCA CTCAGAATGA GTTTAAAGAT TTGTTGGATA ATCTCGCAAG GGAAAATGAA
GGTAAGACGG TCATAATCAG TATGGACGGA GTAATATATA TGAACAGTGC CGGTTTGGGA
ATTATTATTG ATACTTATAA AAAGTTTAAA GAGAAAAAGG GAAGAATGAT ATTGTGCAAC
CTTACACCGG ACATTGAAAA ACTTTTTGAG GTTACAAGGC TGAATAGATT TATAGAAATT
TATGATACAG AGGCTGAAGC TTTAAGCAAG GTATAG
|
|---|
| Protein sequence | MKVEKKEVDG VKIVKLTGQI RISTQNEFKD LLDNLARENE GKTVIISMDG VIYMNSAGLG
IIIDTYKKFK EKKGRMILCN LTPDIEKLFE VTRLNRFIEI YDTEAEALSK V
|
|---|
| |