| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2161 |
|---|
| Symbol | |
|---|
| ID | 4810874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2571866 |
|---|
| End bp | 2572747 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640107564 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038556 |
|---|
| Protein GI | 125974646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000441825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTT CAATTATATA TTTTTGTGCG GTTTCGTTGC CGGAACAGTT TTTGATGGCT
TTGTTCACGT GGTTGATTTT GGGCAAGCCC AAAATAGCGA AGTTTTATAA TGTGTTAGTT
ATGGCAGTCA GTGCGGCGGC TGTGTTTAGG GCAAGTCAAG TTTTTATTCA AAACCTCTTT
GGGTCGACGG ATCGAATTGT AATACAAAAC ATACTTGTAC CGGCAATTCA GGTAATAAGC
TTCTTGGTTC TCATGCTCTT GATTTACAGA GTGAATATTG TTGAGGCGGT CGTCGGCTCA
TTGGTTATGG TAATAGTTTT CACGGTTGCA CAGGCAACGA TAGCGATTTC ATTGATGCTT
TTGTTTGGAT GGACAAGAGA AGAATTTGAC AGCAGCCAGA CAGTGACGGT CGCAACTGCA
TTAGTATATT TTGCCGTAAT GATATTGATA TGCTATTTTA TTTACAAATT TGATTTAAAT
ATTCGCTATT TAATGGATAG ACAAAAGGAC AAGCCATATA CCAGCCGGGT TAAGTTTTTG
GTTTTACAGT TGTCGTTTAG TTGTATGAAT TTGTTTATCG TATACAGTCT GTTCCTTAAC
AACATTACTA TTTTTGAAAC ATTCAGCAAT AAAGTTCTTA CCATACTTTG CTTTTTAGTT
AACATCATTT TTACCGTTAT TCTTGTGAAG AGCGTGTTTA AAATGGGAGA GATAATCCAG
AAAGAAGAGG AACTGAAGAG AAAATACGAC GGAAGAGAAT TTATTCAAAA TATAGATTAT
ATGAAAACTC TTGTTGAAGA AAAGCAGTAC GAGGAAATTA AAAAGTTCCT TGATTCCATG
AAGGCCGACA TAGACAATAA AATCGTGAGT GATAATGATT AA
|
|---|
| Protein sequence | MSSSIIYFCA VSLPEQFLMA LFTWLILGKP KIAKFYNVLV MAVSAAAVFR ASQVFIQNLF
GSTDRIVIQN ILVPAIQVIS FLVLMLLIYR VNIVEAVVGS LVMVIVFTVA QATIAISLML
LFGWTREEFD SSQTVTVATA LVYFAVMILI CYFIYKFDLN IRYLMDRQKD KPYTSRVKFL
VLQLSFSCMN LFIVYSLFLN NITIFETFSN KVLTILCFLV NIIFTVILVK SVFKMGEIIQ
KEEELKRKYD GREFIQNIDY MKTLVEEKQY EEIKKFLDSM KADIDNKIVS DND
|
|---|
| |