Gene Cthe_2147 details

Gene Information

• Locus tag: Cthe_2147
• ID: 4811195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 2551539
• End bp: 2553521
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640107551
• Product: glycoside hydrolase family protein
• Protein accession: YP_001038543
• Protein GI: 125974633
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2730] Endoglucanase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTCAAA AACATTTTAA AAGAAGTCTG TTGTCTGTAT TAACAATTTC AGCCCTGATT 
ATCTCCTGCC TTTTCAGTTT TATTTTCGTT AACGCAGATG ACACTTCTGA AGAACCCGCT 
TTGGAAGGCC TGTCTATACA CTATATGGAC GGCACACTGG ACGTAAAATA TCAGAGCATG 
CGTCCTTACA TAATTATTCA TAACAACAGC GGCATGGATG TGGACATGGC CGACCTTAGG 
GTAAGGTATT ACTACGAAAA AGAGGGTGTT ACCGAAGAAG TCCTTACATG CTTTTATACA 
GCAATAGGTG CGGACAAAAT ATTTGCCGAA TTTCATCCCG AGCTGGGATA CGCTGAAATC 
GGCTTTACCA GTGATGCCGG AATTATAAAA AGCGGTGGCA ACAGCGGGCA GCTGCAGCTG 
GTACTGAAAA AAATATCGAA CGGTTACTAC GACCAAAGCA ATGATTATTC TTATGACCCA 
AGTTACACTG ATTATGCAGA ATATGATAAA ATAACACTCT ATTACAAAGG TAAACTGGTA 
TGGGGAAAAG AAGGACCTCC TCCGCCACCG GAACCGACAC CTCCGCCAAA CAACGACGAC 
TGGCTTCATG TGGAGGGAAA TCTAATCAAG GATGCCCAGG GAAATACCGT TTATCTTACA 
GGAATCAACT GGTTTGGATT TGAAACTGAC GGAGCAAACG GTTTTTACGG CCTTAACAAA 
TGCAACCTTG AGGATTCTCT TGATTTAATG GCAAAATTAG GTTTTAATAT TCTCAGAATC 
CCCATCAGTG CTGAAATTAT TCTGCAATGG AAAAACGGCG AACGTGTAGA AACTTCCTTT 
GTAAACACCT ATGAAAACCC GCGTCTTGAC GGCCTCAGCA GTCTTGAAAT ACTGGACTAT 
ACAATAAATC ACATGAAGAA AAACGGTATG AAAGCCATGC TTGACATGCA CAGTTCAACC 
AAGGACTCAT ACCAGGAAAA CCTCTGGTAT AACAAGGATA TAACCATGGA AGAATTTATC 
GAAGCCTGGA AATGGATTGT CGAAAGATAC AAAGACGATG ATACGGTCAT TGCAGTGGAT 
CTCAAAAATG AACCTCATGG AAAGTACTCC GGTCCGAATA TCGCCAAATG GGATGATTCG 
GATGATCCAA ACAACTGGAA AAGGGCGGCG GAAATCATTG CCGAAGAAAT TCTTGCAATC 
AATCCAAATC TTTTAATCGT CGTAGAGGGT GTTGAGGCAT ACCCGATGGA AGGGTATGAT 
TACACCAACT GCGGTGAGTT TACCACATAC TGTAACTGGT GGGGCGGAAA TTTAAGAGGA 
GTTGCCGACC ATCCTGTTGT CATATCCGCT CCGGACAAGC TCGTATATTC CGTACATGAT 
TACGGACCGG ACATCTATAT GCAGCCGTGG TTTAAAAAAG ATTTCGACAT TAACACCCTT 
TATGAGGAAT GCTGGTACCC AAACTGGTAC TACATTGTCG AGCAAAATAT TGCGCCTATG 
TTAATCGGCG AATGGGGAGG CAAGCTTATC AATGAAAACA ACCGGAAGTG GCTTGAATGT 
TTGGCTACCT TTATTTCAGA AAAGAAACTG CATCATACCT TCTGGGCTTT TAATCCCAAC 
TCAGCCGACA CCGGCGGTCT AATGCTTGAG GATTGGAAAA CCGTTGATGA GGAAAAATAT 
GCAATAATTG AGCCCACATT GTGGAAGAAA GGTCTGGATC ATGTAATACC GCTGGGAGGA 
ATTACGGAGG ATACCTTTAA ATATGGTGAC GTTAACGGTG ATTTTGCCGT AAACTCCAAC 
GACCTTACAT TGATAAAACG CTACGTCCTT AAAAATATTG ACGAATTCCC CTCTTCTCAT 
GGATTGAAAG CTGCCGACGT GGACGGAGAT GAAAAAATAA CCTCCAGTGA TGCTGCTCTT 
GTAAAAAGGT ACGTTCTAAG AGCCATAACA TCATTCCCGG TGGAAGAAAA CCAAAATGAA 
TAA 

 

Protein sequence

MGQKHFKRSL LSVLTISALI ISCLFSFIFV NADDTSEEPA LEGLSIHYMD GTLDVKYQSM 
RPYIIIHNNS GMDVDMADLR VRYYYEKEGV TEEVLTCFYT AIGADKIFAE FHPELGYAEI 
GFTSDAGIIK SGGNSGQLQL VLKKISNGYY DQSNDYSYDP SYTDYAEYDK ITLYYKGKLV 
WGKEGPPPPP EPTPPPNNDD WLHVEGNLIK DAQGNTVYLT GINWFGFETD GANGFYGLNK 
CNLEDSLDLM AKLGFNILRI PISAEIILQW KNGERVETSF VNTYENPRLD GLSSLEILDY 
TINHMKKNGM KAMLDMHSST KDSYQENLWY NKDITMEEFI EAWKWIVERY KDDDTVIAVD 
LKNEPHGKYS GPNIAKWDDS DDPNNWKRAA EIIAEEILAI NPNLLIVVEG VEAYPMEGYD 
YTNCGEFTTY CNWWGGNLRG VADHPVVISA PDKLVYSVHD YGPDIYMQPW FKKDFDINTL 
YEECWYPNWY YIVEQNIAPM LIGEWGGKLI NENNRKWLEC LATFISEKKL HHTFWAFNPN 
SADTGGLMLE DWKTVDEEKY AIIEPTLWKK GLDHVIPLGG ITEDTFKYGD VNGDFAVNSN 
DLTLIKRYVL KNIDEFPSSH GLKAADVDGD EKITSSDAAL VKRYVLRAIT SFPVEENQNE