| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2142 |
|---|
| Symbol | recR |
|---|
| ID | 4811189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2546255 |
|---|
| End bp | 2546854 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640107546 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_001038539 |
|---|
| Protein GI | 125974629 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000288624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTT ATGCCGCACC GATTGCAAGG CTTATAGAGG AGTTTGAGAA GCTCCCCGGC
ATAGGGCACA AGACTGCCCA GCGATTGGCT TTTTATGTGC TGGATATGCC CCAGGAAAAA
GTTGATAGGC TTGCAAACGC TATAACTGAA GCAAAGCAGA AAACAAAATT TTGTTCGGTA
TGTGGCAATT TAACCGATAC TGATGTTTGT CCGCTTTGCA GTTCGGAAAA AAGGGATAGT
TCTGTAATTT GCGTCGTTGA AGACCCCAGG GATGTTGTTG CAATGGAGAA AATACGGGAG
TTTAAAGGGC TTTATCACGT GCTGCACGGT GCGATATCAC CCATGCAGGG GATTGGACCT
GAGGATATAA AAATCAAGGA GCTTTTAGAC AGGATAAAGG AAGGAAACGT CAAAGAGGTC
ATTATTGCAA CAAATCCCAA TATTGAAGGT GAAGCAACTG CAATGTATAT TTCAAAGCTT
ATTAAGCCTT TGGGTGTTAA GACTACAAGA ATAGCTCATG GAATACCTGT CGGCGGAGAT
CTTGAATATG CTGATGAAGT TACATTGGCA AAGGCTTTGG AGGGAAGGCG CGAGATTTAG
|
|---|
| Protein sequence | MSFYAAPIAR LIEEFEKLPG IGHKTAQRLA FYVLDMPQEK VDRLANAITE AKQKTKFCSV
CGNLTDTDVC PLCSSEKRDS SVICVVEDPR DVVAMEKIRE FKGLYHVLHG AISPMQGIGP
EDIKIKELLD RIKEGNVKEV IIATNPNIEG EATAMYISKL IKPLGVKTTR IAHGIPVGGD
LEYADEVTLA KALEGRREI
|
|---|
| |