| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2108 |
|---|
| Symbol | |
|---|
| ID | 4810968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2502533 |
|---|
| End bp | 2503990 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640107515 |
|---|
| Product | arginine decarboxylase |
|---|
| Protein accession | YP_001038508 |
|---|
| Protein GI | 125974598 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.970229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGATT CAAAAGTGAT GAATGTCCCT ATATATAACG CATTGAGAAA TTATTCCAAC
TCATGTCCGA CTGTTTTTCA CATGCCGGGA CACAAGCTTG GAAAAGGTAT ACCTTTGTCA
TTTTTGAGGG ACTTGTATTT GATGGATTTA ACAGAAATAC CAGGCCTCGA CAGTCTTTAC
TGCCCGAGCG GGGTGATTAA AGAGGCCCAG GAATTGGCAG CAAAGGCTTT TGGGGCCGAC
AAAACTTTCT TTTTGGTAAA CGGCTCAACC TGTGGAATTC AGGCGGCAAT TATGACTGTT
TGCAAACCGA AAGACAAGCT TATAATTGCA AGGGACTGCC ACAAATCTGC CGTTGCCGGG
ATGATGCTGT CAGGAGCCGT TCCTGTGTAT GTGAAACCTC AGTTTAACAG TTCTTTTGGC
ATACCTTCGA TTATTTCGGA AAAAGAGATT GAAAAAGCCC TTGCAGAGAA TCCAGACGCT
GTCGGAGTTT ACATAACGAG ACCGAATTAT TATGGAATTT GTTCGGACAT AAAATCCATA
AGTGAATTGG TTCATTCATA CAATAAGATA TTGATTGTTG ACGAAGCCCA TGGTGCGCAT
TTGAAATTTT CAGAAAACCT TCCTCCGTCA TCTGTGGAAT ATGGAGCGGA TATATGCATT
CAGAGCGCCC ACAAGACCCT TCCGGCACTA ACCCAGGGGG CGTACCTTCA TGTCAAAGGC
AGCAGGGTGG ATGTTGAAAA GCTTGAATTT ACCCTGTCCC TTTTAGGAAC CACCAGTCCG
TCGTATATCA TAATGGCTCA TCTGGACATT GCCCGTGCGA TTATGGAAGA AACCGGAGAA
GAAAATATCA AAAGAGTGCT TGCAGGGATA GAAATGCTAA GCAGTGCTCT TTCAAAAAGC
GGTGTTTTTA AAATCCTCTC CGATGACGAT ATAAATGACG GAGAAATAGA CAGAACCAGG
GTTGTGATTA ATGTAAGGAA CACCGGAAAG ACAGGTTTTG AATTTGAAAA AATTTTAAGA
AACCAATATA ATATTCAGGT GGAAATGTCC GATTTATATA ATATTGTGTG TATTACAACC
GTTGCGGATA CTCCTGAAGA CATAATGAGG CTTCAGAGGG CGTTTGTGGA ATTGGCTGAC
TGCCCTGGAA AGTCCGGCGG GCAAAGAAAA TTTGAAAAGG AATTTAAAAT AGACTGCCTG
GACATACCGG AGCAAAGGGT TGAGCCTGCC GCCGTCATGC ACAGCGGTTT TGTAAAAAGA
AAGCTTTATG ATGCTGTTGG CTGTGTAAGC AGAACGATGA TAACTCCGTA TCCGCCGGGG
ATACCTGTGG TATGTCCGGG TGAAGTTATA AACGGAGACA TTGTGGAGTA TATCGTAAAA
ATTATTGAAG CCGGCGGCGT GGTAAACGGT GTGTCTTCAA ACCTTGAAGT TGACGTAATT
GACCGGAGCA ATCTGTAA
|
|---|
| Protein sequence | MVDSKVMNVP IYNALRNYSN SCPTVFHMPG HKLGKGIPLS FLRDLYLMDL TEIPGLDSLY
CPSGVIKEAQ ELAAKAFGAD KTFFLVNGST CGIQAAIMTV CKPKDKLIIA RDCHKSAVAG
MMLSGAVPVY VKPQFNSSFG IPSIISEKEI EKALAENPDA VGVYITRPNY YGICSDIKSI
SELVHSYNKI LIVDEAHGAH LKFSENLPPS SVEYGADICI QSAHKTLPAL TQGAYLHVKG
SRVDVEKLEF TLSLLGTTSP SYIIMAHLDI ARAIMEETGE ENIKRVLAGI EMLSSALSKS
GVFKILSDDD INDGEIDRTR VVINVRNTGK TGFEFEKILR NQYNIQVEMS DLYNIVCITT
VADTPEDIMR LQRAFVELAD CPGKSGGQRK FEKEFKIDCL DIPEQRVEPA AVMHSGFVKR
KLYDAVGCVS RTMITPYPPG IPVVCPGEVI NGDIVEYIVK IIEAGGVVNG VSSNLEVDVI
DRSNL
|
|---|
| |