Gene Cthe_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2088 
Symbol 
ID4810948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2481924 
End bp2482334 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content42% 
IMG OID640107495 
Producthypothetical protein 
Protein accessionYP_001038488 
Protein GI125974578 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGA AAAACAAGGT GGAAGTCAGG ATAGCGGGAA AAGATTATAC GTTGGTTGGT 
TGCGAATCCG AAGAGTATAT TCAGAAGGTG GCGCTGTATA TAGACAAAAA GATGACTGAA
ATCATGAGAA TGAATAATAA GCTTAGCACC TCAATGGCAT CGGTGCTTAC CGCCGTTAAT
GTTGCCGATG AGTATTTCAA AGCTCAGGAG GAGATTGCAA GTCTCAGCAG GGAGTTGAAA
AGTGCAAAGG AAGAGATAGA AAGGCTGAAA GAGGAAAACC GGAGGCTCGC CAATGAAAAT
GCCGTAATAA GCAACAAAAA TACCTACTAT CAATTGGAGC TGGCAAAGAG AGAAGCTGAG
TTGAATGAAG TTCGAAATAC CCTTGAGAAG TCAACGAGAG CAAGAATTTA A
 
Protein sequence
MAEKNKVEVR IAGKDYTLVG CESEEYIQKV ALYIDKKMTE IMRMNNKLST SMASVLTAVN 
VADEYFKAQE EIASLSRELK SAKEEIERLK EENRRLANEN AVISNKNTYY QLELAKREAE
LNEVRNTLEK STRARI