Gene Cthe_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2075 
Symbol 
ID4810673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2468640 
End bp2469368 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content45% 
IMG OID640107482 
Producthypothetical protein 
Protein accessionYP_001038475 
Protein GI125974565 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.116774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGGC ATTCGAAATG GGCCAATATA AAACACAAAA AGCAGAAAAC GGATGCACAA 
AAAGGAAAAA TATTTACAAA GATCGGGAGA GAGATAGCCA TAGTTGTAAA GCAAGGTGGA
CCGGACCCGG AGGTTAATTC AAAGCTCAAG GATGTTATTG CCAAGGCAAA GGCTGCCAAT
ATGCCCAATG AAACCATCAT GAGAAGTATT AAAAAGGCCG CGGGGGAAGT CGATTCCACC
AATTATGAAG AAGTGGTGTA TGAAGGCTAT GGCCCCGGCG GTGTGGCCGT TATTGTCGAA
GCTACGACGG ACAACAGAAA CAGGACTGCG GGCGAGGTAA GACACTTGTT TGACAAATTC
GGAGGAAATC TTGGCACAAC AGGCTGTGTG TCCTTTATGT TTGACAAAAA AGGCGTGATA
CTTATTGAAA AAAGCGACAA AGTTAATGAA GATGACCTTA TGATGAAGGC CTTGGACCTT
GGAGCGGAGG ATTTTACCGC TGAGGATGAG TATTTTGAGA TAATTACGGC ACCGGAAGAT
TTCTCAAAAG TGAGGGAAGG TCTCGAAAAA GAAGGCTATG AATTTGTTGA GGCCGAGGTT
GAGATGGTTC CGCAGACCAC CACCACACTC ACCGATCCGA AACATATTGA GTTTATGAAC
AAGCTTATTG ACAGTCTGGA AGATTTGGAT GACGTCCAGA ACGTTTATCA CAACTGGTAC
GGAGAGTAA
 
Protein sequence
MAGHSKWANI KHKKQKTDAQ KGKIFTKIGR EIAIVVKQGG PDPEVNSKLK DVIAKAKAAN 
MPNETIMRSI KKAAGEVDST NYEEVVYEGY GPGGVAVIVE ATTDNRNRTA GEVRHLFDKF
GGNLGTTGCV SFMFDKKGVI LIEKSDKVNE DDLMMKALDL GAEDFTAEDE YFEIITAPED
FSKVREGLEK EGYEFVEAEV EMVPQTTTTL TDPKHIEFMN KLIDSLEDLD DVQNVYHNWY
GE