Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2075 |
Symbol | |
ID | 4810673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2468640 |
End bp | 2469368 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640107482 |
Product | hypothetical protein |
Protein accession | YP_001038475 |
Protein GI | 125974565 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.116774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGGC ATTCGAAATG GGCCAATATA AAACACAAAA AGCAGAAAAC GGATGCACAA AAAGGAAAAA TATTTACAAA GATCGGGAGA GAGATAGCCA TAGTTGTAAA GCAAGGTGGA CCGGACCCGG AGGTTAATTC AAAGCTCAAG GATGTTATTG CCAAGGCAAA GGCTGCCAAT ATGCCCAATG AAACCATCAT GAGAAGTATT AAAAAGGCCG CGGGGGAAGT CGATTCCACC AATTATGAAG AAGTGGTGTA TGAAGGCTAT GGCCCCGGCG GTGTGGCCGT TATTGTCGAA GCTACGACGG ACAACAGAAA CAGGACTGCG GGCGAGGTAA GACACTTGTT TGACAAATTC GGAGGAAATC TTGGCACAAC AGGCTGTGTG TCCTTTATGT TTGACAAAAA AGGCGTGATA CTTATTGAAA AAAGCGACAA AGTTAATGAA GATGACCTTA TGATGAAGGC CTTGGACCTT GGAGCGGAGG ATTTTACCGC TGAGGATGAG TATTTTGAGA TAATTACGGC ACCGGAAGAT TTCTCAAAAG TGAGGGAAGG TCTCGAAAAA GAAGGCTATG AATTTGTTGA GGCCGAGGTT GAGATGGTTC CGCAGACCAC CACCACACTC ACCGATCCGA AACATATTGA GTTTATGAAC AAGCTTATTG ACAGTCTGGA AGATTTGGAT GACGTCCAGA ACGTTTATCA CAACTGGTAC GGAGAGTAA
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Protein sequence | MAGHSKWANI KHKKQKTDAQ KGKIFTKIGR EIAIVVKQGG PDPEVNSKLK DVIAKAKAAN MPNETIMRSI KKAAGEVDST NYEEVVYEGY GPGGVAVIVE ATTDNRNRTA GEVRHLFDKF GGNLGTTGCV SFMFDKKGVI LIEKSDKVNE DDLMMKALDL GAEDFTAEDE YFEIITAPED FSKVREGLEK EGYEFVEAEV EMVPQTTTTL TDPKHIEFMN KLIDSLEDLD DVQNVYHNWY GE
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