| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2057 |
|---|
| Symbol | |
|---|
| ID | 4810653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2446982 |
|---|
| End bp | 2448814 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640107462 |
|---|
| Product | CRISPR-associated TM1812 family protein |
|---|
| Protein accession | YP_001038457 |
|---|
| Protein GI | 125974547 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02221] CRISPR-associated protein, TM1812 family
[TIGR02549] CRISPR-associated DxTHG motif protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAT TCATTTCTCT TCTTGGTACG TCGAAATACG TTCCTTGTAA TTATTTTATT
AAAAACAGGG AAGAACTCAA AATTAATGAT TGCTGTTATG TTCAGAAAGC AATTTTGGAT
ATTTTGAGAC AGGAAAATGT TATACCTGAT AAAATAATTA TTTTTACTAC TGATGAAGCA
CATGTAAGTA ATTGGGAAAA TAACAAATGG AATAACAAAG GAGACAAAAA TGATGTTCAA
GAGATTGAGG ATGAACTGCA AAAACGGCCG GGATTAAAAG GTGAGCTTGA AAAATACAAA
GAGTTAACAG GTGCTGATTT TAAAAGTGTA AGAATACCTA ATGGAATTAG AGAAGAAGAT
TTATGGGAAA TATTTAGAAC GATATTTGAT GAAATAGATG AAAATGATGA AATAATATTT
GATGTTACCC ATTCATTCAG ATATTTGCCA ATGTTGGTTT TTATAGTGAT AAATTACGCC
CGGGTAGTAA AAAAATGCAA GCTTAAGAGT ATTTATTATG GAGCGTTTGA AGTATTGGGC
ACTCCCGAAA CAGTGGCAAA AATTCCATTG GAGGAAAGAA ATGCTCCCAT TTTTGATCTC
ACATCTTTTG TGGATTTGTT TGACTGGACG ATGGGAATTG ACAGATATTT GAATACCGGC
GATGTATCAG TAGTGCATGA ACTTACAGAT ATACAAATAA AAAGAGTAAA TAAGGAAAAA
CTTAAATTTA TTTCAAAATC AGAACAAGGA GTTGATCCAA AAACTTTATT TATGGATTCG
AGGCAGTTAA GAGCACTATC TGAATCAATG AAAAATTTTA GCGACGTAGT GTTTACATGT
AGAGGTTTGG AATTGACACG GGTTGCATGT GAATTAAAAG AAAAACTGAG AGAAGTTACT
GAAAGTGCTT CAAGACAGCA TATAATACCA TTGATGCCGG TTCTTGAAAT GATGAAAGAA
AGATTTGATA AATTTAGCAA AGATAACGAT TACATAAATA TTATTGAAAC TGCGAGATGG
TGTGCTGACA ATAAAATGTA CCAGCAAGGA CTGACAATTT TGGAAGAAGG ACTGATTAGT
TTTGGCTGTG AAAAGTTGGG TTATGAAAAT TTAAGCGATA AAATAGACCT TGATAAGAGA
AGAAAGATAG GTTCATATGC TTTTGTTGTT AGTAATGATT TTGGAAGAAA AAGCGACAAT
AAAAAAGAGA AGATACCTTT ATTAAATATA AAATCAGATG TTATAACTGA TCTGTTGATA
CTAATAGATG AAATAAGCAG TATCAGAAAT GACATTAATC ATGCCGGTTG GAGGAAAGAT
CCTTCTGAAG CCGGTGCTTT TGGGGAACAA CTTAAGAATT TTATTTCACG TGCGGAAAAA
ATTATTTCTC CAGAAAACTT TTCCACAGAA TCAGATAAAT GTATTAATAA TGACAGTGTA
GACAAGGAAA AGAAAATGCT TTTGATATTG TCCCATAAAC TTGTGCCCAA ACAGGAAGAA
GAAGCAAGAC AACGCTTTGG CATATCAAAG TTTTTGCCAA TGCCCAATGA GTTACATAAT
AAATGGTCAA ATATACCTCC TGAGCTGGAG GATTTACGAG ACTATCTCAA CGACATTTTG
GAATGGATTG ATTTAAATGC GCAAGAAGGA GATTATGCTC TGATACAGGG AGATTACGGA
GCTACATTTA TTGCTGTCAA CCATTGCCTG GCCAAAGGAA TTATTCCTGT TTATTCAACA
ACTCACAGAA TTGTGCGAGA GGAAAAAAAT GAAGACAAGG TTATAAGTGT AAGAGAATTT
GAACATGTAA TTTTAAGAAA ATATGAAAAT TAA
|
|---|
| Protein sequence | MLKFISLLGT SKYVPCNYFI KNREELKIND CCYVQKAILD ILRQENVIPD KIIIFTTDEA
HVSNWENNKW NNKGDKNDVQ EIEDELQKRP GLKGELEKYK ELTGADFKSV RIPNGIREED
LWEIFRTIFD EIDENDEIIF DVTHSFRYLP MLVFIVINYA RVVKKCKLKS IYYGAFEVLG
TPETVAKIPL EERNAPIFDL TSFVDLFDWT MGIDRYLNTG DVSVVHELTD IQIKRVNKEK
LKFISKSEQG VDPKTLFMDS RQLRALSESM KNFSDVVFTC RGLELTRVAC ELKEKLREVT
ESASRQHIIP LMPVLEMMKE RFDKFSKDND YINIIETARW CADNKMYQQG LTILEEGLIS
FGCEKLGYEN LSDKIDLDKR RKIGSYAFVV SNDFGRKSDN KKEKIPLLNI KSDVITDLLI
LIDEISSIRN DINHAGWRKD PSEAGAFGEQ LKNFISRAEK IISPENFSTE SDKCINNDSV
DKEKKMLLIL SHKLVPKQEE EARQRFGISK FLPMPNELHN KWSNIPPELE DLRDYLNDIL
EWIDLNAQEG DYALIQGDYG ATFIAVNHCL AKGIIPVYST THRIVREEKN EDKVISVREF
EHVILRKYEN
|
|---|
| |