Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2031 |
Symbol | |
ID | 4811001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2408634 |
End bp | 2409110 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640107440 |
Product | transposase IS200-like protein |
Protein accession | YP_001038435 |
Protein GI | 125974525 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000295785 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATA ATGCTAGTTT AGCACATACG CAATGGAATT GTAAATACCA TATAGTATTT GTACCAAAAT ATAGGAGACA AGTAATATAC GGTAAAATAA AGAAAGACAT AGGGCAAATA TTAAGAAAGC TATGCGAAAT GAAAGGAGTA GAAATAATAG AAGCAAGCCT TTGTCCCGAT CATATACATA TGTTAGTTAG TATACCACCA AAAATAAGTG TATCAAGTTT TATGGGATAT TTGAAAGGAA AAAGCTCGTT AATGATTTTT GATAGGCATG CAAATTTAAA GTATAAATAT GGGAACAGAC ATTTTTGGTG CAGGGGATAC TATGTAGACA CAGTAGGAAG GAACAGAAAA GCAATTGAGC AATATATAAG GAGACAATTA CAAGAAGATA TAGCAAGCGA CCAGATAAGT TTAAATGAGT ATATAGACCC GTTTACGGGT GAGCGAGTAA ATAAAAGCAA AAAATAA
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Protein sequence | MRDNASLAHT QWNCKYHIVF VPKYRRQVIY GKIKKDIGQI LRKLCEMKGV EIIEASLCPD HIHMLVSIPP KISVSSFMGY LKGKSSLMIF DRHANLKYKY GNRHFWCRGY YVDTVGRNRK AIEQYIRRQL QEDIASDQIS LNEYIDPFTG ERVNKSKK
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