Gene Cthe_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2025 
Symbol 
ID4810995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2404025 
End bp2404582 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content35% 
IMG OID640107434 
Productresolvase helix-turn-helix region containing protein 
Protein accessionYP_001038429 
Protein GI125974519 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.122452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATACG CATATTTTAT TGAAAATACA GGCGGTGAGT TCAAAGATAA CAGTTGCTTG 
TTTAGATATA TAAAAGAACA GAATATATCA GAAGATAACA TATACATTGA TACAGCAGAT 
AATAAAGATG AATTAGATGC GCTTTTAGAG AATATTGAGC CAGGGGATGC AATAGTATTA 
AGAACAGTAA CAGATTTAGC AGAAAAGCGA AGTGAACTAT TACATCTACT AAAGGAACTG 
CAAGACTTTG GTATCTTGAT ACATAGTATA ATGGAGCCAT TTCTAAATGG TTTAGAGTAT 
TTCGACAGAC TTCAAGGTTC AATAGAAATC AGTAAATATT ATGCTGAGAA GAAAAGAAGA 
TTAGCCTTTG AAGAGGCAAG AAAGCAAGGG GTAGTAGGAA GACCAAAGAT ACCTCAGGAA 
CAGATAGAAA CAGCATTAAA GCTGTATGCA AGCAAGTTAT TTACCACAGA GGAAATTGCA 
AAGTTATCTG GGGTAAGCAG TAGCACCCTT TACAGAGCAT TAAAGGAGCA GGGGCAGTTG 
TTTCGTATTT ATGAATAG
 
Protein sequence
MVYAYFIENT GGEFKDNSCL FRYIKEQNIS EDNIYIDTAD NKDELDALLE NIEPGDAIVL 
RTVTDLAEKR SELLHLLKEL QDFGILIHSI MEPFLNGLEY FDRLQGSIEI SKYYAEKKRR 
LAFEEARKQG VVGRPKIPQE QIETALKLYA SKLFTTEEIA KLSGVSSSTL YRALKEQGQL 
FRIYE