Gene Cthe_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2020 
Symbol 
ID4810990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2400022 
End bp2400813 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID640107430 
Producthypothetical protein 
Protein accessionYP_001038425 
Protein GI125974515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000297308 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAG CATTAAAATA CGCAGAAGCA AATATCCCAG TCATACCATT GCATTGGATT 
TGTGAGGATG GCTCCTGCTC CTGCAAGGAA GGGAGTAATT GTGACAGCAA AGGAAAGCAT
CCGTTATATA CCGGCTGGTA CAAGAATTCC ACTGCTTATG TTGAGCAAAT AAGGAAATGG
TGGACGAAAA CCCCCAATGC CAATATAGGC ATTCCTACAG GCGAGAAGTC TGACTGGCTG
GTACTTGATG TGGATGATGG CGGTGATGAA ACCATATCTG CACTTGAAGC AACACATGGA
AAACTCCCGG ATACGGTTAC TGCTGTTACA GGAAGTGGAG GTTGGCACTA TGTCTTTAAA
TACCCTAAAG GCCGGAGTAT CCCAAATAAG ACCAAGTTTG CATCGGGTCT TGATACGCGT
TCAACAGGTG GACTGATTGT CGTGGCTCCA AGCATTCATG TAAGCGGTAA TCAGTACCAA
TGGTTAGAAG GACATTCTCC CTTTGACAGA ACCCCGGCAG AAGCTCCAGC ATGGTTATTA
AAGCTCATGG AAAGGGAGGA AGTATTGCTT ACACCCTTTG AAGGTAGCAG TATTATAGCA
GAGATTAAGG AAGGCAGCCG CAATAGCACC CTGACGAGCC TTGCCGGGAG TATGAGAGCA
AGAGGAATGA CGGAGGAAGG CATCTATACG GCATTACTTG CAGAAAACAA CGCAAGGTGC
AATCCTCCGC TTGATGAAGC GGAAATTAAG AAAATATATA GTTTAGGTTT TCAAAGAGTT
AGTAGCTTGT AA
 
Protein sequence
MDAALKYAEA NIPVIPLHWI CEDGSCSCKE GSNCDSKGKH PLYTGWYKNS TAYVEQIRKW 
WTKTPNANIG IPTGEKSDWL VLDVDDGGDE TISALEATHG KLPDTVTAVT GSGGWHYVFK
YPKGRSIPNK TKFASGLDTR STGGLIVVAP SIHVSGNQYQ WLEGHSPFDR TPAEAPAWLL
KLMEREEVLL TPFEGSSIIA EIKEGSRNST LTSLAGSMRA RGMTEEGIYT ALLAENNARC
NPPLDEAEIK KIYSLGFQRV SSL