Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2020 |
Symbol | |
ID | 4810990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2400022 |
End bp | 2400813 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640107430 |
Product | hypothetical protein |
Protein accession | YP_001038425 |
Protein GI | 125974515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000297308 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCAG CATTAAAATA CGCAGAAGCA AATATCCCAG TCATACCATT GCATTGGATT TGTGAGGATG GCTCCTGCTC CTGCAAGGAA GGGAGTAATT GTGACAGCAA AGGAAAGCAT CCGTTATATA CCGGCTGGTA CAAGAATTCC ACTGCTTATG TTGAGCAAAT AAGGAAATGG TGGACGAAAA CCCCCAATGC CAATATAGGC ATTCCTACAG GCGAGAAGTC TGACTGGCTG GTACTTGATG TGGATGATGG CGGTGATGAA ACCATATCTG CACTTGAAGC AACACATGGA AAACTCCCGG ATACGGTTAC TGCTGTTACA GGAAGTGGAG GTTGGCACTA TGTCTTTAAA TACCCTAAAG GCCGGAGTAT CCCAAATAAG ACCAAGTTTG CATCGGGTCT TGATACGCGT TCAACAGGTG GACTGATTGT CGTGGCTCCA AGCATTCATG TAAGCGGTAA TCAGTACCAA TGGTTAGAAG GACATTCTCC CTTTGACAGA ACCCCGGCAG AAGCTCCAGC ATGGTTATTA AAGCTCATGG AAAGGGAGGA AGTATTGCTT ACACCCTTTG AAGGTAGCAG TATTATAGCA GAGATTAAGG AAGGCAGCCG CAATAGCACC CTGACGAGCC TTGCCGGGAG TATGAGAGCA AGAGGAATGA CGGAGGAAGG CATCTATACG GCATTACTTG CAGAAAACAA CGCAAGGTGC AATCCTCCGC TTGATGAAGC GGAAATTAAG AAAATATATA GTTTAGGTTT TCAAAGAGTT AGTAGCTTGT AA
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Protein sequence | MDAALKYAEA NIPVIPLHWI CEDGSCSCKE GSNCDSKGKH PLYTGWYKNS TAYVEQIRKW WTKTPNANIG IPTGEKSDWL VLDVDDGGDE TISALEATHG KLPDTVTAVT GSGGWHYVFK YPKGRSIPNK TKFASGLDTR STGGLIVVAP SIHVSGNQYQ WLEGHSPFDR TPAEAPAWLL KLMEREEVLL TPFEGSSIIA EIKEGSRNST LTSLAGSMRA RGMTEEGIYT ALLAENNARC NPPLDEAEIK KIYSLGFQRV SSL
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