Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2005 |
Symbol | |
ID | 4810937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2385166 |
End bp | 2385924 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640107419 |
Product | IstB-like ATP-binding protein |
Protein accession | YP_001038414 |
Protein GI | 125974504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00256513 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTCA ATAAAATGCT TATCGAAACT TACATGAAGA AGCTAAAGAT GCCACAGGTG GCAAAAACCT ATGAATCCCT GGCAAGAGAA GCCGCAGACA ATAATCTGGA TTATGAAGAA TACCTGCTGT GTGTGCTGGA ACAGGAAGTA CATCAGCGGG AGAATAACCG GATCCAGAGA GGGATCCGGC AAGCAGGCTT TCCTGTTATC AAAACGATTG AAAGCTTTGA CTTCCTTGCC ATACCTTCTT TGAACAAACC GCGGGTATTG AAACTCATGC AGGGAGAATA TATCCGAAGA AGAGAAAATG TCATTTTGAT AGGCAACTCC GGAGTAGGGA AAACCCATAT TGCAACTGCG CTCGGTTACG AGGCTTGTCG GCAGGGTATG AAGGTCAAAT TCTATACGGC AGCTGGTTTG ATAAATGAAT TGCTTGCAGC ACAGCAGGAA TATCGTCTTA ATAAGCTTGA AAAGCAATGG CTGGCGCCGC ATTTAGTGAT CCTTGATGAA TTAGGCTATG TGCCTTTCAG TAAAATCGGA GCAGAATTGT TGTTCCAGTT CTGCTCTTCC CGATATGAGA GGGGCAGCCT GATCATAACT ACAAACTTAG AATTTCCAAG ATGGACGGAG GTGTTAGGCG ATGAGCAAAT GACAGCCGCC CTGCTTGACC GCTTGACCCA TAATGCGCAC ATTCTGAACA TCAATGGTGA AAGCTACAGG TTTAAGCAGG CTCTTTCCAA GCAGGCAAAT AATGACTGA
|
Protein sequence | MPVNKMLIET YMKKLKMPQV AKTYESLARE AADNNLDYEE YLLCVLEQEV HQRENNRIQR GIRQAGFPVI KTIESFDFLA IPSLNKPRVL KLMQGEYIRR RENVILIGNS GVGKTHIATA LGYEACRQGM KVKFYTAAGL INELLAAQQE YRLNKLEKQW LAPHLVILDE LGYVPFSKIG AELLFQFCSS RYERGSLIIT TNLEFPRWTE VLGDEQMTAA LLDRLTHNAH ILNINGESYR FKQALSKQAN ND
|
| |