Gene Cthe_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2005 
Symbol 
ID4810937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2385166 
End bp2385924 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID640107419 
ProductIstB-like ATP-binding protein 
Protein accessionYP_001038414 
Protein GI125974504 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00256513 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTCA ATAAAATGCT TATCGAAACT TACATGAAGA AGCTAAAGAT GCCACAGGTG 
GCAAAAACCT ATGAATCCCT GGCAAGAGAA GCCGCAGACA ATAATCTGGA TTATGAAGAA
TACCTGCTGT GTGTGCTGGA ACAGGAAGTA CATCAGCGGG AGAATAACCG GATCCAGAGA
GGGATCCGGC AAGCAGGCTT TCCTGTTATC AAAACGATTG AAAGCTTTGA CTTCCTTGCC
ATACCTTCTT TGAACAAACC GCGGGTATTG AAACTCATGC AGGGAGAATA TATCCGAAGA
AGAGAAAATG TCATTTTGAT AGGCAACTCC GGAGTAGGGA AAACCCATAT TGCAACTGCG
CTCGGTTACG AGGCTTGTCG GCAGGGTATG AAGGTCAAAT TCTATACGGC AGCTGGTTTG
ATAAATGAAT TGCTTGCAGC ACAGCAGGAA TATCGTCTTA ATAAGCTTGA AAAGCAATGG
CTGGCGCCGC ATTTAGTGAT CCTTGATGAA TTAGGCTATG TGCCTTTCAG TAAAATCGGA
GCAGAATTGT TGTTCCAGTT CTGCTCTTCC CGATATGAGA GGGGCAGCCT GATCATAACT
ACAAACTTAG AATTTCCAAG ATGGACGGAG GTGTTAGGCG ATGAGCAAAT GACAGCCGCC
CTGCTTGACC GCTTGACCCA TAATGCGCAC ATTCTGAACA TCAATGGTGA AAGCTACAGG
TTTAAGCAGG CTCTTTCCAA GCAGGCAAAT AATGACTGA
 
Protein sequence
MPVNKMLIET YMKKLKMPQV AKTYESLARE AADNNLDYEE YLLCVLEQEV HQRENNRIQR 
GIRQAGFPVI KTIESFDFLA IPSLNKPRVL KLMQGEYIRR RENVILIGNS GVGKTHIATA
LGYEACRQGM KVKFYTAAGL INELLAAQQE YRLNKLEKQW LAPHLVILDE LGYVPFSKIG
AELLFQFCSS RYERGSLIIT TNLEFPRWTE VLGDEQMTAA LLDRLTHNAH ILNINGESYR
FKQALSKQAN ND