Gene Cthe_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1957 
Symbol 
ID4810740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2331305 
End bp2332645 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content43% 
IMG OID640107373 
Productextracellular solute-binding protein 
Protein accessionYP_001038368 
Protein GI125974458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000130159 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGGT CAAAATATTC TCTCGTGTTG TCATTCCTTT GTTTCTTAGC AATTCTGACA 
GTGACGAGGT GTAGTCTGGG GGGAAAAGTG CAGGCGCCGA ACGAATATAC TCGCGTGCAG
GCTGCTGAAA TAGAAGAGCC TGCCGAGGAT GTGGAAATAG AATTTTGGAC GTATAATGAC
GGCTGGAAAG CTCCTATAAA CCATTTTCAA TTGATTCATC CCAAAATAAA AATAAAACTT
GTCAAATTTG ATTTTAACGA TATGGGCAAT GTATATAAAA AAGCGTTGGC AGCGGGAGAA
GGGCCTGACA TATTGTTTTT TGACAGCGCT TATTACAGTC AGTTTACCAC GGGAGAATAT
CTTGAAGATT TGCTCAAAGA GCCTTATTAT GCAGGAAGGT ACGAAAAAGA TTTTCCGAAG
GATATATGGG AAAGCAATAA ATCACTTGAC GGAAAGCGTC TTTTGGCAAT GACTTTCCTG
ACATCACCCG TTGTGACTTT TTACCGGGCG GATGTAATGG AGGAAAACGG TTTTCCGTCG
GAACCTGAAG AACTTGCCAA ATTTATTGAA AAAAGCGAAA ATCTTATGGC TATAGCGAAA
AAGCTGAAAT CCAAGGGTCA GTACATTTTT CAGATGCCTG TGGATATCAT AAATCTTGCC
GGTCTGTATT CGGGAATATT TGATGAAAAC CTGAGATTTG TAAGAAACTC AGACTTGTTT
GTGCAAGCGC TGGATATGGC AAGGGAAATT AAAAGGCTGG ATTTGTCAAT TGGTGCAAAT
ATTGTGGAGG AAGCGGCAAA GGAGGCTGTC CGGAACGGAG AACTGGTAAT GGTGCTGGGC
ATCGGGTCGT GGGGGACCAG TACCATACAG AGCTATGCTC CCGACCAGGC AGGTAAGTGG
AGGGTCACTG CGCCGCCCCT GGGGCTTAAG GTATGGTATT CGGATACCAA GCTTGCGATT
AATGCCCAAA GCAAATACAA GAAATGGGCA TGGCTGTTTG TTGAATATGT GGCAACCCAG
CAGGAGGGCG GGGAGAACAT TGACATGATT TCCGGCTATT GTCCTGCAAG AAGAAATCTT
AAAGTTATGC TGAGAGAAAA CGAGTATTTC GGTAATCAGC ATATTCAGCC GCTTATTGAA
GATTTGGCAG AGGAAATGGT TCAGTACAGG CAGACTCCTT TGGATGACAG GGCACTTCAA
ATATTTAATG AGGAAATATT CAGAGCCATC GAAAACAATG TTGATTCCCA GAAAACGATA
AAGGATATTG CAAATAAAGT GGAATATGAG CTGAAAAAGG ATCGGGAAGC TTTACTTAAG
GGGAAAAAGC GGGTAAAATA G
 
Protein sequence
MRRSKYSLVL SFLCFLAILT VTRCSLGGKV QAPNEYTRVQ AAEIEEPAED VEIEFWTYND 
GWKAPINHFQ LIHPKIKIKL VKFDFNDMGN VYKKALAAGE GPDILFFDSA YYSQFTTGEY
LEDLLKEPYY AGRYEKDFPK DIWESNKSLD GKRLLAMTFL TSPVVTFYRA DVMEENGFPS
EPEELAKFIE KSENLMAIAK KLKSKGQYIF QMPVDIINLA GLYSGIFDEN LRFVRNSDLF
VQALDMAREI KRLDLSIGAN IVEEAAKEAV RNGELVMVLG IGSWGTSTIQ SYAPDQAGKW
RVTAPPLGLK VWYSDTKLAI NAQSKYKKWA WLFVEYVATQ QEGGENIDMI SGYCPARRNL
KVMLRENEYF GNQHIQPLIE DLAEEMVQYR QTPLDDRALQ IFNEEIFRAI ENNVDSQKTI
KDIANKVEYE LKKDREALLK GKKRVK