| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1955 |
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| Symbol | |
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| ID | 4810738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2327899 |
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| End bp | 2330055 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107371 |
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| Product | RNA binding S1 |
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| Protein accession | YP_001038366 |
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| Protein GI | 125974456 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA TTATTTCCAC ACTTGTAAAA GAGTTTAATC TCAAGCCTTT CCAGGTGGAA
AACACCGTAA AACTTATTGA CAGCGGCAAT ACCATTCCCT TTATTGCAAG GTACAGGAAA
GAAATAACGG GAGAATTGAA CGATCAGGTG CTAAGGCAGC TTCATGAAAG ACTGATTTAC
CTGAGGAACC TTGAGGCAAG AAAAGAAGAA GTTCGGCGCC TGATTGACGA GCAGGGAAAG
CTTACCGCGG AAATTACGGC ATCTCTTGAA AAAGCGACCA CCCTCCGGGA GGTTGAAGAT
ATATACAGGC CTTTCAGGCC AAAAAGAAGA ACCAGGGCGA CTGTTGCAAA GGAAAAAGGA
CTTGAACCTT TGGCCGAAAT TATTATGGCC CAGGAACTTA AAACCGGCAG TATTGAAGAC
ATAGCCAAGC CTTTTATAAA TCCTGAGAAG GAAGTCAATA CCGTCGAGGA TGCCTTAAAC
GGAGCAATGG ACATAATAGC CGAAGACATT TCGGACAATC CGCATATCAG AAGTATTGTG
CGGGACGTGT TTATGAAACA AGGAATGATT GTGTCCAAAA AGAAGAAGGA TGAAGATTCG
GTATACAGAA TGTACTATGA TTTCTCGGAA CCGGTGGCAA AAATAGCCGG TCACAGGGTT
CTTGCGATAA ACAGGGGAGA AAAGGAAGAG TTTTTGCAAG TCAAAATTGA AGTTCCTGAA
GAAACGCTTA TGGAGCAGCT TAAGGCGAAA CTTGTAAAGA GGCCTCCTTC CATAACGTCG
GAATATGTAG AAAAGGCGTT GGCGGACTCT TATGAGCGCC TTATTTTTCC TTCGGTTGAG
AGGGAAGTAA GGAATGAACT TACGGAGAAT GCCGAGGAAC AGGCGATAAA GGTCTTTGCG
ACCAATCTTA AAAATCTTTT GCTCCAGCCT CCTGTGAAAG GAAAAACCGT TTTGGGGCTT
GACCCTGCAT ACAGGACGGG CTGCAAAATT GCAGTGGTGG ATGAGACGGG AAAAGTACTT
GACACTGCCG TAATATATCC GACACCTCCC CAGAACAAGG TTGAGGAAGC AAAAGAGATT
ATGAAGCGGC TTATTGAGAA ACACGGTGTT GATATAATAT CAATAGGCAA CGGGACTGCT
TCGAGGGAGT CTGAAATATT TGTCGCCGAG CTTTTGAAGG AGATAGACAG AAAAGTTTAC
TATATGGTGG TAAGCGAAGC GGGAGCTTCG GTTTATTCCG CTTCGAAGCT TGGGGCGGAG
GAATTTCCCG ACTTTGACGT GGCTTTAAGA AGTGCTGTGT CCATAGCCAG AAGGCTTCAG
GACCCATTGG CGGAGCTGGT TAAAATAGAT CCCAAATCCA TAGGCGTGGG CCAGTACCAG
CACGACATGA ATCAAAAGCG GCTGAGTGAG ACTTTGCAGG GCGTGGTTGA AGATTGTGTA
AACAGCGTGG GCGTTGACCT GAATACGGCC TCACCGTCTC TTTTGTCTTA CATCTCGGGA
ATAAACTCCG TAATTGCAAA AAATATTGTG GAATACAGGG AAACCAACGG AAAGTTTAAA
AGAAGAGAAG AACTCAAAAA AGTTAAGAAA CTAGGTGACA AAACTTTCGA GCAATGTGCC
GGCTTTCTTA GGATACCTGA CGGAGACAAT GTTCTTGACA ATACTTCCGT ACATCCGGAG
TCTTATGAGG CGGCCAAAAA GCTTCTTGAT ATTATGGGAT ACAGCCTTGA AGATGTGAAG
AACAGAAAAC TTGATGGACT TGTGGAAAAA GTGGAGAAAA TGGGTATGGA AAAAGTTGCC
AGGGAGATTG GTGTCGGAGT GCCGACTTTG AAAGATATTA TAAAAGAGCT TTTAAAGCCT
GGACGCGACC CCAGGGATGA GCTTCCGAAA CCGATGCTTC TTACCGACGT GCTGCATTTG
GAGGATTTGA GGCCGGGCAT GATATTGACC GGAACCGTAA GGAATGTTGC CGACTTTGGT
GCCTTTGTGG ATGTGGGAGT GCACCAGGAC GGGCTGGTTC ACATATCCGA GCTTAGCGAC
AAGTATGTAA AAAGTCCCAT GGATGTGGTG TCGGTGGGGG ATATAGTGAA GGTCAGAATT
TTGGATGTTG ATGTTGAAAG AAAAAGAATA TCCATGAGCA TGAAGGGTGT CAATTAA
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| Protein sequence | MSDIISTLVK EFNLKPFQVE NTVKLIDSGN TIPFIARYRK EITGELNDQV LRQLHERLIY
LRNLEARKEE VRRLIDEQGK LTAEITASLE KATTLREVED IYRPFRPKRR TRATVAKEKG
LEPLAEIIMA QELKTGSIED IAKPFINPEK EVNTVEDALN GAMDIIAEDI SDNPHIRSIV
RDVFMKQGMI VSKKKKDEDS VYRMYYDFSE PVAKIAGHRV LAINRGEKEE FLQVKIEVPE
ETLMEQLKAK LVKRPPSITS EYVEKALADS YERLIFPSVE REVRNELTEN AEEQAIKVFA
TNLKNLLLQP PVKGKTVLGL DPAYRTGCKI AVVDETGKVL DTAVIYPTPP QNKVEEAKEI
MKRLIEKHGV DIISIGNGTA SRESEIFVAE LLKEIDRKVY YMVVSEAGAS VYSASKLGAE
EFPDFDVALR SAVSIARRLQ DPLAELVKID PKSIGVGQYQ HDMNQKRLSE TLQGVVEDCV
NSVGVDLNTA SPSLLSYISG INSVIAKNIV EYRETNGKFK RREELKKVKK LGDKTFEQCA
GFLRIPDGDN VLDNTSVHPE SYEAAKKLLD IMGYSLEDVK NRKLDGLVEK VEKMGMEKVA
REIGVGVPTL KDIIKELLKP GRDPRDELPK PMLLTDVLHL EDLRPGMILT GTVRNVADFG
AFVDVGVHQD GLVHISELSD KYVKSPMDVV SVGDIVKVRI LDVDVERKRI SMSMKGVN
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