Gene Cthe_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1929 
Symbol 
ID4810787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2301276 
End bp2301884 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID640107345 
Producthypothetical protein 
Protein accessionYP_001038340 
Protein GI125974430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0173546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA TAACGTTATA TGCCGGGAAA ATCAACCAAA TGCCCGGATT GATAAAAGAA 
GTCAAGAAAT CTGTGGTGGA TTACAAGTCG GAGTTATCAG CATTAAAAAG GAAAACGCTC 
AATATCAACA GAAGTGTATG CAATTTGGAT GAAGTAATAA GTTCCATACA GGCATCTTCC 
CAGACTCAGG ATAGAAAAAT TGATTCACTT GAGAAATTCT GCAGTGAAAG CGAGAAGTTT 
ATATCGGAAG TAGTACGTAT CGATGAAGAA GTTGCTGAGC TTATCAATAA ACGGGAAGAA 
AATTTTTACA AAGAATATTA TTATTTAAAA CCGGAAAGCG AGAAAAGCGG CTGGGAAAAA 
ATCAAGGACG GCTTAAAGTC GGTTGCGGAG TGGTGTAAAG AGAATTGGAA ATCCATTGCC 
AAGATAGTGG CTGCCGCAGT AGTTATTACC GGGTTGGGGA TAGCGGCGGC TTTGACAGGA 
GGAGTATTGG GAGTCATACT GGCGGGAGCA TTCTGGGGAG CATTGGCCGG AGGATTGATA 
GGAGGAGCGG TTGGAGGAAT AGCCGCTGCG ATAAATGGAG GTTCGTTTTT GGTAGGATTG 
GGGCATTAA
 
Protein sequence
MATITLYAGK INQMPGLIKE VKKSVVDYKS ELSALKRKTL NINRSVCNLD EVISSIQASS 
QTQDRKIDSL EKFCSESEKF ISEVVRIDEE VAELINKREE NFYKEYYYLK PESEKSGWEK 
IKDGLKSVAE WCKENWKSIA KIVAAAVVIT GLGIAAALTG GVLGVILAGA FWGALAGGLI 
GGAVGGIAAA INGGSFLVGL GH