| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1920 |
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| Symbol | |
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| ID | 4810778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2290579 |
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| End bp | 2291277 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640107337 |
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| Product | stage II sporulation protein R |
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| Protein accession | YP_001038332 |
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| Protein GI | 125974422 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02837] stage II sporulation protein R |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.336826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAATT CGTCAAATAA CATCGGCAAG AAAAACATAT TTGTAAAAGT ACTTACGGCA
ATCATTCTTT TTGTGTCAGT CCTGTCATGC GTCGGGTTAA TATCCTACTC GGAGAATGTA
AGCAGCGGGC TTGCAGATAA TATTATTCGT CTGCATGTTC TGGCAAACAG TGATTCTCCG
GAAGACCAGC AGTTAAAAAG GGATGTCAGG GATGTTGTAA TAAATTTCAT GAAGGACAAG
CTTAAAAATG TAAAAGATGT GGAAACCACA AAAAGAATAA TAGAAGAAAA CTCAGAAGCT
ATAAAACAGG TGGCTCTCAG TGAAATCAGA AGGCAGAATA AAGATTATGA CGTAACGGTT
ATGTTTGGAA AATATCCTTT TCCAACCAAG GTTTATGGGG ACATAAGCCT TCCTACCGGA
AATTATCAGG CTTTGAGAGT TGTTATAGGT AACGGTGAAG GTCAAAATTG GTGGTGCGTG
CTTTTTCCAC CCCTCTGCTT TGTGGATGCC ACTCACGGGA CTGTGCCGGA TTCGGTAAAG
GATGATTTGA AAGAGGTTTT AAGCGAAGAG GAGTATTATC TTATTACAGC GCAGGATGAA
GGCGACGATA TTGAAATCGA GATAAAATTT AAAATTGTGG AGATGTTTCA GAAGTCAAAA
ATAAAAATTG CGAGCGCAAT GAATAAAATA TTCCAATGA
|
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| Protein sequence | MLNSSNNIGK KNIFVKVLTA IILFVSVLSC VGLISYSENV SSGLADNIIR LHVLANSDSP
EDQQLKRDVR DVVINFMKDK LKNVKDVETT KRIIEENSEA IKQVALSEIR RQNKDYDVTV
MFGKYPFPTK VYGDISLPTG NYQALRVVIG NGEGQNWWCV LFPPLCFVDA THGTVPDSVK
DDLKEVLSEE EYYLITAQDE GDDIEIEIKF KIVEMFQKSK IKIASAMNKI FQ
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