Gene Cthe_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1881 
Symbol 
ID4809212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2231735 
End bp2232571 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content39% 
IMG OID640107300 
Productintegrase catalytic subunit 
Protein accessionYP_001038295 
Protein GI125974385 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATA GAAATGAGAA GAAACTCAGC ATAACAAGGC AAGCAGAATT ATTGAGCTTA 
AACCGTACGA GCGTTTACTA CAAGCCTGCT CCGGTAAATG AGGAGGAATA CCTGATTAAG
CGTATCATTG ATGAAATTTA CGCGTCTTAT CCGGAATATG GCTATCGCAG GATGACAAGT
ATATTGAACA AGGATTATCA CATTCATATC AATCGAAAAC GGACCCGGCG TTATATGAGG
GAAATGGGCA TACATGGATT CTGTCCTGGC CCCAACCTCA GCAAACGAAT ACATGGTAAG
AATTTGTATC CATATCTGTT GAGAAACTTG AAAATTGATC ATCCTAATCA GGTATGGTCC
ATAGATGTGA CCTATTGCCG AATGAAACGC GGTTTCATGT ATATGGTTGC AATAATAGAC
TGGTATTCTC GGTATATTGT TGGGTTTGAA CTATCAAACA CTCTTGATAA GACATTCGTC
ATAGAAGCAA TCCAAAAGGC CATAAAGCGA TATGGCAAGC CTGAAATCAT GAACAGTGAT
CAAGGCTCAC AGTTTACCAG TGATGATTAC ATAAATCTAT TAAAAAATAA CGGTATCAAA
ATATCTATGG ATGGAAAAGG AAGAGCATTA GACAACCAAA GGATAGAACG ATTTTTCCGT
TCCTACAAGT GGGAGAAACT TTATCTTGAA GAGTGCGAAA CGGTACAACA ACTTAGACAA
ATCACAAAGG AATATGTGGA GCACTATAAC CATAGGAGAC CGCACCAGTC ATTGGATTAC
AAAACACCGG CAGAGTATTA CTTTGGAGGA TATGACCAGC TACTGGCAGT TGTATAG
 
Protein sequence
MIDRNEKKLS ITRQAELLSL NRTSVYYKPA PVNEEEYLIK RIIDEIYASY PEYGYRRMTS 
ILNKDYHIHI NRKRTRRYMR EMGIHGFCPG PNLSKRIHGK NLYPYLLRNL KIDHPNQVWS
IDVTYCRMKR GFMYMVAIID WYSRYIVGFE LSNTLDKTFV IEAIQKAIKR YGKPEIMNSD
QGSQFTSDDY INLLKNNGIK ISMDGKGRAL DNQRIERFFR SYKWEKLYLE ECETVQQLRQ
ITKEYVEHYN HRRPHQSLDY KTPAEYYFGG YDQLLAVV