Gene Cthe_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1878 
Symbol 
ID4809209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2230054 
End bp2230848 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content33% 
IMG OID640107297 
Producthypothetical protein 
Protein accessionYP_001038292 
Protein GI125974382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAT TAATAACGAG TAATAATCTT GAGCAGGTTA TTGAAAAAAA TAACCTGATT 
AAAGATGATA TATTAAGATT AACAAATGAT TTTACAGTCA GATTTAATAA GTCGGGAGTA
ACGGGGCAGG ATAAACTGTC TTTTTCGGTA TTAAAAGAGA ATCATTTAAT CCAGATTCCC
ATTGATGATG AGTATTGGGG CGGGGCTATT ATTACAAAGG GAAATATCAA AATACCAGTT
ATCAATACAG CCCAGCCACG TGTCTATCAA TATTTTGTTG CATGGCATGA AATATATCAT
TTGTTCTATG ACCTCAGTTT AAGGGATGAG ACCCATAACA TTGCCGTTGA TATGGATTTA
AATGAAAGAA AAGCAGATTA TTTTGCAGCA AAAATGATTT TTGGCAATGT GTACGATTAC
TACTATTCAT TAGATGATGA AGATTTTATC GACAGAGTCA TAAAATGCAT GGATGTATAT
AAGGCACCAT ATAAGGCAGT ACTGATAGAA CTGTTTGAAG AAGCCGTTAC AAAATATAAT
GATTTGGATT TAAAAGAAAA AATTCTTGAG CATTTTGATA ATAAGCCTGA GAACTTAGTG
CAGAAATTTA TAGATTTGGA ATTGGATGCA GAGTTAGTGA AACCCTCATA TGTTGTAAGT
TTAGGTGGTT TGGAGAAGAA AATACAAAGT GTTATGAAAG AAAACCCAGA TGTCTCCCAT
CATAAAGATA ATTATCAGTT TCTGCTCACG CTAAAGAATA AAATTAAAAA AGGAGTGGAG
GGGCTTGCCA AATGA
 
Protein sequence
MSELITSNNL EQVIEKNNLI KDDILRLTND FTVRFNKSGV TGQDKLSFSV LKENHLIQIP 
IDDEYWGGAI ITKGNIKIPV INTAQPRVYQ YFVAWHEIYH LFYDLSLRDE THNIAVDMDL
NERKADYFAA KMIFGNVYDY YYSLDDEDFI DRVIKCMDVY KAPYKAVLIE LFEEAVTKYN
DLDLKEKILE HFDNKPENLV QKFIDLELDA ELVKPSYVVS LGGLEKKIQS VMKENPDVSH
HKDNYQFLLT LKNKIKKGVE GLAK