| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1876 |
|---|
| Symbol | |
|---|
| ID | 4809207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2227716 |
|---|
| End bp | 2228570 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640107295 |
|---|
| Product | Tn7-like transposition protein A |
|---|
| Protein accession | YP_001038290 |
|---|
| Protein GI | 125974380 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC GGAAAACGGA TTGGGATGAA AATAAATTAA ATAAATGGTT ACAGGAGGGT
AGGGGGCAGG GAGAAGGAAA GGAATATAAA CCCTGGCTTA CTGTTACAGA TTTCTCCTCA
AGGGGGAGGT GCAGCCGTAT CAAGGGAATC AAAACGGGAA GGGTTCATCA TTTTATGGCG
GATATTGAAA CCTGGTACTT TTACCTTTTA GAATTTGACG AAGGGAACAA AATAATCGAT
ATTCGGGAGT TTTATCCGCT GCTGGATTTT GATGAAGTTG TCCAAGATAA GCAGGATATT
AGCAAGAATC TGTTTATTGA CAAAAAAACT GGCTGTCCAT ATGTCCTTAC CACAACATTT
CTAATTACCG TTAAGTTGAA GAATGGGAAA ACCTCATATG CTGCAAGGAG TGTGAAATCA
TCAAAAATTC TTGAGAGAAA AACAACGCTT GAAAAGTTGG AAATGGAGCG CAGGTATTGG
CAAATAAAAG GTGTGGACTG GGCTATTGTG ACGGAGAAAG ACATAAACCG TGATAAAGCC
AAAAACATAG AATGGGCGCT TTCATCAATA CATATGCTGC CTGACATGAG GTTTAATGAG
GATGATATAG TTGAACTTGG TTCAGCGCTT CAGTTCAGGC TTGCTAACAG TACAAAATCC
ATACGGAGTG TAATTGCTGA TTTTGATTAT GATTATGCTC TGGATACAGG GACAGGCCTG
TTCTTGTTCC GTTATCTGGT TGCCGTAAAA GCGATTAAGA TTGATATGGA AACACCAATA
GACTTAAATG CTCCCGCAAA CAGTATTCAA ATTGTTAGGG ATATGGAGGA GGGAATGCGG
AGTGCTGGCG GTTAA
|
|---|
| Protein sequence | MAKRKTDWDE NKLNKWLQEG RGQGEGKEYK PWLTVTDFSS RGRCSRIKGI KTGRVHHFMA
DIETWYFYLL EFDEGNKIID IREFYPLLDF DEVVQDKQDI SKNLFIDKKT GCPYVLTTTF
LITVKLKNGK TSYAARSVKS SKILERKTTL EKLEMERRYW QIKGVDWAIV TEKDINRDKA
KNIEWALSSI HMLPDMRFNE DDIVELGSAL QFRLANSTKS IRSVIADFDY DYALDTGTGL
FLFRYLVAVK AIKIDMETPI DLNAPANSIQ IVRDMEEGMR SAGG
|
|---|
| |