Gene Cthe_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1843 
Symbol 
ID4809389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2187963 
End bp2188412 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content42% 
IMG OID640107257 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001038257 
Protein GI125974347 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000000228759 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTTTT CAACCAAAGG AAGATATGGA CTTAGGGCAA TGATTGACCT TGCGGTATAC 
TCCAACGGTG AGCACGTTAC TTTGGCCAGT ATTGCCGAAA GACAGGGGAT TTCAACAAAT 
TATCTTGAAC AGGTATTTTC AACTCTGAGA AAATCAGGAC TGGTTAAAAG CGCAAAAGGT 
GCCCAGGGAG GCTATATGCT GTCGGAAGTT CCGTCGGACA TAAAAGTGGG CAGAATTTTG 
AGAGCCCTTG AAGGTCCTCT TTCGGTTACG GATGAAGACG ATGAGGAAGT GTCGGAGAAC 
GAGTCGTCTA TAAGAAAATG TATCAGGATT AATGTTTGGG AAAAAATGAA CAAAAGTCTT 
AACGAGTTGG TGGATTCCAT AACTTTGGAG GATCTTGCTG AAGATTACCG AAAACGAAAT 
GGTATTGACA GTACAATGTA TTACATATAA
 
Protein sequence
MRFSTKGRYG LRAMIDLAVY SNGEHVTLAS IAERQGISTN YLEQVFSTLR KSGLVKSAKG 
AQGGYMLSEV PSDIKVGRIL RALEGPLSVT DEDDEEVSEN ESSIRKCIRI NVWEKMNKSL 
NELVDSITLE DLAEDYRKRN GIDSTMYYI