| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1830 |
|---|
| Symbol | |
|---|
| ID | 4809814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2169800 |
|---|
| End bp | 2171014 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640107244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001038244 |
|---|
| Protein GI | 125974334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.034164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT TAAAAGAACT GCTTAAAAAG AAAGATGGGT CGTTAACTGT AGAGGCTGCA
ATTTCATTGC CGCTGTTTAT GTGTGTGTTT TTATCCATAG CCTTTTTCAT GAAGGTTGTG
TATATACATA ATAATGTGCA ATATGCAATA AACGGCGCTG CCAATGAAGT TGCAACCTAC
AGCTATCTTT ATTCAATTTC CGGCCTCCAG AAGGTGAATG ATGCTATTAC GGAAACAACG
GATGAATATG GAACGACTGC ATCAGAGCAT ACAAAAGAGA TTCTGGAAGC TTTTGATGCC
TTGGGAGATA TTTCACAGCA GAGTCTGGAA TCGTTTAAAG GACTGGCGGC AGGTGATACA
ACACAAATAG ACAAGTTAAA GGAGTTGTAT GAAGAAGGTA AAATTTCAGT GGGGACCGTC
CAGAAAGTCA TTGGTGAAGT AAAGGAGAAT CCCAGAAAAG AGTTCATCAG TGTTGCTTCT
TTGTTTTTCA GTGCAGGATA TGAAAAAATC AAATCTGAAT TGTCAGAGCC GTTAATTAAG
CTCTTTATGA GAAAATACAT TGACGAGAGA ATATTCAACA GCAAGGGTGG ACCGGGAGCT
TATATTGTAG TAAAGGAAGG AAAAGACCCG TTAGATGCTT TTAGCTTTAA CAACCGGATA
TTTACCGACA ATAAGAGCAT AGATATAAGA GTAAAATATA AGATAAAGAC TTCGTTGCCT
ATAAACATTC TTCCTGAAAT CAGCATCGAG CAACGGGCAA CTGTCAGAGG ATGGATGGAC
GGAGATAAAT CGGCACCGGT AAAAGAGGAA CCAAAAGAAG AATCTTTATG GGATAAAGCG
CCTTTTGAGT ACGGTAAAGT GATTACCGAG AAAGAACTTG AAAAGTATCC GGACAAATAT
CCGAATTCCG GGCATATATA TGAAGTCAGG AGTATCAATT TGGATTGCGA AACGTATAAA
GATATTAAAA AAGCAAAGAG CTCTTTAAAG AGCAGTATTA ATAAATTTAG TTCGAAAACT
AAAGATGTCG CTGAAATTAC TTCAAGGACA TTTATTATAG TGATACCGGA AGGGACATTG
ACAGACGAAA TCAAGGCAAT GTTGGAAGAA CTGAAAAGTG AAGCGGCTTC CGGGACACCT
TCGATAGAGG TGATTTATAA AGAAGGATAT GGAAGACAAA GTAATGTAAG TGACAGCAGC
GAAGAAGAAA AGTAA
|
|---|
| Protein sequence | MNILKELLKK KDGSLTVEAA ISLPLFMCVF LSIAFFMKVV YIHNNVQYAI NGAANEVATY
SYLYSISGLQ KVNDAITETT DEYGTTASEH TKEILEAFDA LGDISQQSLE SFKGLAAGDT
TQIDKLKELY EEGKISVGTV QKVIGEVKEN PRKEFISVAS LFFSAGYEKI KSELSEPLIK
LFMRKYIDER IFNSKGGPGA YIVVKEGKDP LDAFSFNNRI FTDNKSIDIR VKYKIKTSLP
INILPEISIE QRATVRGWMD GDKSAPVKEE PKEESLWDKA PFEYGKVITE KELEKYPDKY
PNSGHIYEVR SINLDCETYK DIKKAKSSLK SSINKFSSKT KDVAEITSRT FIIVIPEGTL
TDEIKAMLEE LKSEAASGTP SIEVIYKEGY GRQSNVSDSS EEEK
|
|---|
| |