| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1823 |
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| Symbol | |
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| ID | 4809807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2157057 |
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| End bp | 2158316 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107237 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001038237 |
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| Protein GI | 125974327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.158541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGA AGTTTTGCAT ATTTGGCAAA AATACAATTA AGGTTTTGGC AATTGCACTG
TCGGCACTGC TGGTATTCGC AGGCTGTTCC GGCAAAGTGG AGGAGCCGGT TGATAACAAA
CCCGGAACTG ATACTTCCGC AGAAGACACC ATAAAGGTGG GAATTCTTCA CTCCTTAAGC
GGAACCATGG CTATTAGCGA GGTATCCCTC AAAGATGCGG AATTGATGGC AATAGAAGAA
ATTAACCAGG CCGGAGGTCT GCTGGGCAAA AAAATTGAAC CGGTGATTGA AGACGGAGCT
TCCGATTGGC CTACTTTTGC AGAAAAGGCA AAGAAACTGC TCCAAAATGA CAAGGTTGCA
ACCGTTTTCG GATGCTGGAC TTCAGCCAGC CGTAAAGCCG TATTGCCGGT GTTTGAAGAA
AATAACGGAC TTTTGTGGTA TCCGGTGCAG TATGAGGGCA TGGAGTCATC ACCAAATATC
TTCTATACCG GTGCGGCACC CAATCAGCAG ATTGTTCCCG CAGTCGAATG GCTTTTGGAA
AACAAGGGAA AAAGATTTTT CCTCCTTGGC TCCGATTATG TATTTCCCAG AACCGCAAAC
AAAATTATCA AAGCTCAGCT AAGCGCCATA GGTGGGGAAC TTATTGCAGA GGAGTATACT
CCTTTGGGTC ATACCGATTA CAGTACCATT GTAAATAAAA TTAAAACCGC AAAACCGGAT
GTAGTGTTTA ACACCCTGAA CGGGGACAGC AATGTTGCCT TCTTCAAACA GCTCAAGGAT
GCGGGAATCA CGTCTGAAGA CATTACCGTT TGTTCTGTAA GTGTTGCAGA AGAAGAAATA
AGGGGTATAG GCGCTGAAAA TATAAAAGGT CACCTGGTTT CATGGAACTA TTACCAGACT
ACGGATACCC CGGAAAACAA AGAGTTTGTG GAAAAGTACA AATCTAAATA CGGAAGCGAC
AGGGTTACCG ATGATCCCAT AGAAGCGGCA TATATAGCAG TTCATTTGTG GGCTGAGGCA
GTTAAAAAGG CCGGTTCCTT TGAGGTGGAA AAGGTTAAGG AGGCAGCCAA AGGACTTGAA
TTTAAAGCTC CTGAAGGGCT TGTGAAAATT GAAGGAGAGA ACCAGCACCT GTGGAAGCCG
GTGAGGATTG GTGAGGTACA GGAAGACGGA CTTATCAAGG AAATCTGGAG TACAAGTGAA
GCCGTAAGGC CCGACCCATA CTTAAAAACC TACGACTGGG CAAAAGGCTT AAGCGATTAG
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| Protein sequence | MIKKFCIFGK NTIKVLAIAL SALLVFAGCS GKVEEPVDNK PGTDTSAEDT IKVGILHSLS
GTMAISEVSL KDAELMAIEE INQAGGLLGK KIEPVIEDGA SDWPTFAEKA KKLLQNDKVA
TVFGCWTSAS RKAVLPVFEE NNGLLWYPVQ YEGMESSPNI FYTGAAPNQQ IVPAVEWLLE
NKGKRFFLLG SDYVFPRTAN KIIKAQLSAI GGELIAEEYT PLGHTDYSTI VNKIKTAKPD
VVFNTLNGDS NVAFFKQLKD AGITSEDITV CSVSVAEEEI RGIGAENIKG HLVSWNYYQT
TDTPENKEFV EKYKSKYGSD RVTDDPIEAA YIAVHLWAEA VKKAGSFEVE KVKEAAKGLE
FKAPEGLVKI EGENQHLWKP VRIGEVQEDG LIKEIWSTSE AVRPDPYLKT YDWAKGLSD
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