| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1822 |
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| Symbol | |
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| ID | 4809806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2156010 |
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| End bp | 2156918 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107236 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001038236 |
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| Protein GI | 125974326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.564217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGTT ATTTACTGCA GATTTTTAAC GGGATAAGCG TAAGCTCGGT GCTTTTACTG
GCAGCCCTGG GATTGGCAAT AACCTTCGGG CTTATGAGAA TTATCAACAT GGCCCATGGT
GAGATGATAA TGATAGGTGC CTATACCACG TATATGGTGC AAAACTTATT TATATCATTT
TTGGGAGAAA GATATTTCGA TCTGTATTTT ATTGCGGCAA TACCTCTTTC GTTCCTGATT
ACAGGATTTG TCGGTTATTT GCTGGAGATT TCAATTGTAA AACGCCTGTA CGGCAGGACT
TTGGACAGTT TATTGGCCAC ATGGGGAATA AGCCTTATAC TTCAGCAGTT AGCCAGAAAC
ATTTTCGGTG CACCCAATGT AGATGTGAGA AGTCCAAGAT GGCTGAACGG TGGGGTGGTT
GTTTTTGGAA ATATTCAGCT CCCCTACAAA AGGCTTTTTA TAATCCTGCT GGCTGCCCTT
TGCATAGCCG GAGTATATTT ATTCCTCTTT AAAAGCGACA GCGGAAGAAG GATAAGAGCG
GTTATGCAGA ATAGAAGTAT GGCCGAAAGC CTTGGTATAA ACACAAGAAA GGTGGATTCC
ATGACCTTTG CAATTGGGTC GGGATTGGCA GGCATTGCCG GATGTGCCTT GACCCTGTTA
GGCTCAATCG GACCAACCTT AGGAACCAAC TACATTGTGG ATACCTTTAT GGTTGTGGTA
TTGGGCGGTG TCGGAAGAAT TATCGGCACA GTGGCCGGAG CAGCAGCGAT CGGAATCGGA
AATACGACTT TCGAATATTT TACCAACGCC TCTTTGGGAA AGGTACTTGT ATTTCTTGCG
GTTATTCTCT TTCTTCAATG GAAGCCTCAG GGGTTCTTTA GCGTAAGCAG CAGAGTATTG
GATGAGTAA
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| Protein sequence | MDSYLLQIFN GISVSSVLLL AALGLAITFG LMRIINMAHG EMIMIGAYTT YMVQNLFISF
LGERYFDLYF IAAIPLSFLI TGFVGYLLEI SIVKRLYGRT LDSLLATWGI SLILQQLARN
IFGAPNVDVR SPRWLNGGVV VFGNIQLPYK RLFIILLAAL CIAGVYLFLF KSDSGRRIRA
VMQNRSMAES LGINTRKVDS MTFAIGSGLA GIAGCALTLL GSIGPTLGTN YIVDTFMVVV
LGGVGRIIGT VAGAAAIGIG NTTFEYFTNA SLGKVLVFLA VILFLQWKPQ GFFSVSSRVL
DE
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