| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1820 |
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| Symbol | |
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| ID | 4809804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2154102 |
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| End bp | 2154860 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107234 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_001038234 |
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| Protein GI | 125974324 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.257202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGATA GCATTTTGGA AATAAGAAAT TTGACGGTAA GTTTTGACGG ATTTAAAGCC
GTAGACGGAC TTAGCACTTC TGTGAAGAAA GGCGACATCC ACTTTTTTAT CGGACCTAAC
GGTGCCGGAA AGACTACTTT GCTTGATGCA ATATGCGGGC GTGTCAAACC GGCGGAAGGA
AAAATCATCT TTAAAGGCAT GAAAGACGTG ACAAAAATGT CGGAACATGA GATTGTGGAA
CTGGGAATAG GACGAAAGTT TCAGGTACCT TCCATTTTCA TGGGAATTAC AATTTATGAA
AATATGGAAC TTGCGGCGGC AAGAAAGAGG TCCTTGTATT CCACACTCTT TACAAAACTC
AGCAGGGAGC AGACGGAAAG AATTCAGGAT GTGCTTCAGA AAATCGGGCT GTATGAGAAA
AGATACCGTA CCCCTGCGGC TCTTTCCCAC GGCGAAAAGC AATGGCTCGA AATAGGCATG
CTTTTGGTTC AGCAGCCGGA AATCATGCTT TTAGACGAGC CGGTGGCAGG GATGGGAAGA
AAGGAAACCG ACAGGACGGG AAGGCTTCTT AAAGAAATAT CGGAAAAATG TTCGGTTATT
GTTGTGGAGC ATGATATGGA GTTTGTCCGG GAATATGCGG ATAAGGTGAC GGTATTGCAT
GAGGGAAGGC TTTTGGATGA GGGAAATATG CATAAAATTC AGCAAAATCC CAAAGTGATG
GAAGTGTATC TGGGAAGAGG AGGTGAAGGA TGTGCTTAA
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| Protein sequence | MSDSILEIRN LTVSFDGFKA VDGLSTSVKK GDIHFFIGPN GAGKTTLLDA ICGRVKPAEG
KIIFKGMKDV TKMSEHEIVE LGIGRKFQVP SIFMGITIYE NMELAAARKR SLYSTLFTKL
SREQTERIQD VLQKIGLYEK RYRTPAALSH GEKQWLEIGM LLVQQPEIML LDEPVAGMGR
KETDRTGRLL KEISEKCSVI VVEHDMEFVR EYADKVTVLH EGRLLDEGNM HKIQQNPKVM
EVYLGRGGEG CA
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