Gene Cthe_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1812 
Symbol 
ID4809796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2148082 
End bp2148870 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID640107226 
Producturease accessory protein UreD 
Protein accessionYP_001038226 
Protein GI125974316 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA AATTCGGAAA AGAAAGCAGG CTGTACATAA GAGCAAAGGT TTCAGACGGA 
AAAACATGCC TTCAGGATTC GTATTTCACA GCACCTTTTA AAATAGCCAA ACCCTTTTAT
GAAGGGCATG GCGGATTTAT GAATCTTATG GTTATGTCAG CTTCAGCGGG AGTTATGGAG
GGTGACAATT ACAGGATTGA AGTGGAATTG GACAAAGGCG CAAGAGTGAA ACTGGAAGGC
CAGTCCTACC AGAAGATTCA CCGGATGAAA AATGGAACGG CAGTGCAGTA CAACAGTTTT
ACCCTTGCAG ACGGAGCGTT TTTGGATTAT GCTCCCAACC CCACCATACC TTTTGCCGAC
TCAGCATTTT ATTCAAATAC AGAATGCAGG ATGGAAGAAG GCTCAGCCTT TATCTATTCG
GAGATACTGG CCGCGGGCAG GGTTAAGAGC GGTGAAATTT TCCGGTTCAG GGAATATCAC
AGCGGGATAA AGATTTATTA CGGCGGGGAA CTGATTTTTC TTGAAAATCA GTTCCTTTTT
CCAAAAGTGC AGAATCTTGA AGGAATCGGA TTTTTTGAAG GTTTTACACA TCAGGCGTCA
ATGGGTTTTT TTTGTAAGCA GATAAGCGAT GAACTTATTG ATAAACTTTG TGTAATGCTT
ACGGCCATGG AGGATGTCCA GTTCGGATTG AGCAAAACAA AGAAGTATGG CTTTGTTGTT
CGGATTCTCG GAAACAGCAG TGATAGGCTG GAAAGTATTC TAAAACTGAT TAGAAATATC
CTCTATTAG
 
Protein sequence
MKNKFGKESR LYIRAKVSDG KTCLQDSYFT APFKIAKPFY EGHGGFMNLM VMSASAGVME 
GDNYRIEVEL DKGARVKLEG QSYQKIHRMK NGTAVQYNSF TLADGAFLDY APNPTIPFAD
SAFYSNTECR MEEGSAFIYS EILAAGRVKS GEIFRFREYH SGIKIYYGGE LIFLENQFLF
PKVQNLEGIG FFEGFTHQAS MGFFCKQISD ELIDKLCVML TAMEDVQFGL SKTKKYGFVV
RILGNSSDRL ESILKLIRNI LY