| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1800 |
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| Symbol | |
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| ID | 4809784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2126418 |
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| End bp | 2127929 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640107214 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001038214 |
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| Protein GI | 125974304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.199953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTATA CCGTACAGCC GGGAGATTCT CTTTATACCA TTTCCCAAAG ATTTGGAGTA
ACAATTGCAC AGATAAAAAG TGCCAACCAA CTTACAAGCG ATATTATCTA TGTAGGTCAG
CGTCTATACA TTCCTATAGG AATTCAAGCA CCTGTAGTAT ACACCGTAAG ACCCGGTGAT
ACACTGTATC TGATAGCCCG AAGATACAAC ACCACCGTGG ACAGTCTTAT GGCTCTTAAC
AATCTTAGCA GTACTGAGCT GAGAATCGGC CAGCAGCTAA CCATCCCCCT TTATACCGAA
GCAGTGGTCA ATGTGGGTAC CGCAAACATC CGCAGAGGCC CGGGAACCAA CTTTGGCATA
ATTACTCGCA TGACAAACGG TGCAAGGCTT CCGGTTATCG GTTTTAGCAA CAACTGGTAC
CAGGTACGTC TTTACAACGG AAGAGAAGGC TGGATTTCGG GAAGCATCGT CACCCGCAAT
GTTTACAGCG GACGCAGGCC TATAACAGGA GTACTGGGAT TCTACACCCT TGAGGAAGGT
CCCACCCTCC CAAGCTCTTT TACATCCTTT GCAAACAATA CAGGGCAGCT TTCCTCAACC
GCATTGTTCA TGTTCAGAAT CAGCGCCGCC AACCCAACCA CCATCGAAAA ATTTGGAGAG
TTTACCGACC AGGATGTTCG CAACCTGGTG GCAATTGCCC ACAGGAACAA TGTAAAAATT
ATGCCTGTGG TTCACAACCT GCTGTACAGA CCCGGGGGAA CCACTCTTGC CAAAAACGTT
GTAAAAACTT TGGTCTCAGA CCCAAGAAAC AGAAATGCCT TTGCGCTGAA CCTTGTAAAT
CTCATAGAAA GATACGGCTT TGACGGTGTA AATATTGACA TCGAGGATGT GTTTATAGAA
GACAGCGACA ATCTTTCCCT CCTGTACACC GAGATATCCG AAGTCCTGAG GCCAAGAGGA
TATTTCTTCT CTGCATCGGT TCCTTCAAGG GTAAGCGATG AACCCTTCAA TCCTTTCTCC
GATCCGTTTA ACTACAGTGT GATCGGAAGA GCGGTGGACG AATTTGTCGT AATGCTATAC
AACGAATTCG GATGGCCGGG AAGCCCGCCG GGACCTGCGG TCACCATAGG TTGGATGGAA
CGCGTGCTAA GATACACCAT GAGCAAAATG CCGAGGGATA AGATTATGGC AGCCGTGTCC
GTGTTTGGAT TCGACTTTAA TCTCACCACA GGCCGAAACA CCTATGTGAC TTACCAGTCG
GCGATCAACC TTGCCCGAAG GTACAACAGT GAAATTATTT TCAACGAGGA AAGACAGACG
CCCATGTTTA CCTACAGAGA CGCACAGGGA AATCAGCACG AAGTATGGTT CGAAGATGCC
CGAAGCCTCA GATCCAAAAT TCAGCTGGCC TGGGAACTCG GCATAAAGGG CGTTGCTTTG
TGGAGACTTG GGATGGAAGA CCCAAACATC TGGCCAATGC TTCGAAATGA AGTGGTGGTA
AGGAAGTTTT AA
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| Protein sequence | MWYTVQPGDS LYTISQRFGV TIAQIKSANQ LTSDIIYVGQ RLYIPIGIQA PVVYTVRPGD
TLYLIARRYN TTVDSLMALN NLSSTELRIG QQLTIPLYTE AVVNVGTANI RRGPGTNFGI
ITRMTNGARL PVIGFSNNWY QVRLYNGREG WISGSIVTRN VYSGRRPITG VLGFYTLEEG
PTLPSSFTSF ANNTGQLSST ALFMFRISAA NPTTIEKFGE FTDQDVRNLV AIAHRNNVKI
MPVVHNLLYR PGGTTLAKNV VKTLVSDPRN RNAFALNLVN LIERYGFDGV NIDIEDVFIE
DSDNLSLLYT EISEVLRPRG YFFSASVPSR VSDEPFNPFS DPFNYSVIGR AVDEFVVMLY
NEFGWPGSPP GPAVTIGWME RVLRYTMSKM PRDKIMAAVS VFGFDFNLTT GRNTYVTYQS
AINLARRYNS EIIFNEERQT PMFTYRDAQG NQHEVWFEDA RSLRSKIQLA WELGIKGVAL
WRLGMEDPNI WPMLRNEVVV RKF
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